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Labs:
Project Teams:
] 2021
Buhmann J, Sheridan A, Gerhard S, Krause R, Nguyen T, Heinrich L, Schlegel P, Lee W-CAllen, Wilson R, Saalfeld S et al..
2021. Automatic Detection of Synaptic Partners in a Whole-Brain Drosophila EM Dataset. Nature Methods. 18(7):771-4.
2018
Buhmann J, Krause R, Lentini RCeballos, Eckstein N, Cook M, Turaga SC, Funke J.
2018. Synaptic partner prediction from point annotations in insect brains.. MICCAI 2018: Medical Image Computing and Computer Assisted Intervention.
2017
Funke J, Klein J, Moreno-Noguer F, Cardona A, Cook M.
2017. TED: A Tolerant Edit Distance for segmentation evaluation.. Methods. 115:119-27.
2016
Funke J, Klein J, Moreno-Noguer F, Cardona A, Cook M.
2016. Structured learning of assignment models for neuron reconstruction to minimize topological errors.. IEEE 13th International Symposium on Biomedical Imaging (ISBI). :607-11.
2012
Funke J, Andres B, Hamprecht F, Cardona A, Cook M.
2012. Efficient automatic 3D-reconstruction of branching neurons from EM data.. Computer Vision and Pattern Recognition (CVPR), 2012 IEEE Conference on.