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2022
Plaza SM, Clements J, Dolafi T, Umayam L, Neubarth NN, Scheffer LK, Berg S.  2022.  neuPrint: An open access tool for EM connectomics.. Frontiers in Neuroinformatics. 16:896292.
2020
Scheffer LK, C Xu S, Januszewski M, Lu Z, Takemura S-ya, Hayworth KJ, Huang GB, Shinomiya K, Maitlin-Shepard J, Berg S et al..  2020.  A connectome and analysis of the adult Drosophila central brain.. Elife. 9
2019
Berg S, Kutra D, Kroeger T, Straehle CN, Kausler BX, Haubold C, Schiegg M, Ales J, Beier T, Rudy M et al..  2019.  ilastik: interactive machine learning for (bio)image analysis.. Nature Methods. 16:1226-32.
2017
Takemura S-ya, Aso Y, Hige T, Wong AM, Lu Z, C Xu S, Rivlin PK, Hess HF, Zhao T, Parag T et al..  2017.  A connectome of a learning and memory center in the adult Drosophila brain.. eLife. 6:e26975.
Beier T, Pape C, Rahaman N, Prange T, Berg S, Bock DD, Cardona A, Knott GW, Plaza SM, Scheffer LK et al..  2017.  Multicut brings automated neurite segmentation closer to human performance.. Nature Methods. 14(2):101-102.
2016
Holcomb PS, Morehead M, Doretto G, Chen P, Berg S, Plaza S, Spirou G.  2016.  Rapid and semi-automated extraction of neuronal cell bodies and nuclei from electron microscopy image stacks.. Methods in molecular biology (Clifton, N.J.). 1427:277-90.
Haubold C, Schiegg M, Kreshuk A, Berg S, Koethe U, Hamprecht FA.  2016.  Segmenting and Tracking Multiple Dividing Targets Using ilastik.. Advances in anatomy, embryology, and cell biology. 219:199-229.