Biblio

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2021
Speiser A, Müller L-R, Matti U, Obara CJ, Legant WR, Kreshuk A, Macke JH, Ries J, Turaga SC.  2021.  Deep learning enables fast and dense single-molecule localization with high accuracy. Nature Methods. 18(9)
2019
Speiser A, Müller L-R, Matti U, Obara CJ, Legant WR, Ries J, Macke JH, Turaga SC.  2019.  Teaching deep neural networks to localize single molecules for super-resolution microscopy. arXiv e-prints. :arXiv:1907.00770.
2018
Berens P, Freeman J, Deneux T, Chenkov N, McColgan T, Speiser A, Macke JH, Turaga SC, Mineault P, Rupprecht P et al..  2018.  Community-based benchmarking improves spike rate inference from two-photon calcium imaging data. PLOS Computational Biology. 14(5):e1006157.
2017
Berens P, Freeman J, Deneux T, Chenkov N, McColgan T, Speiser A, Macke JH, Turaga SC, Mineault P, Rupprecht P et al..  2017.  Community-based benchmarking improves spike inference from two-photon calcium imaging data.. PLoS Computational Biology. 14(5):e1006157.
Speiser A, Yan J, Archer E, Buesing L, Turaga SC, Macke JH.  2017.  Fast amortized inference of neural activity from calcium imaging data with variational autoencoders.. Neural Information Processing Systems (NIPS 2017).