Biblio

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2009
Darzacq X, Yao J, Larson DR, Causse SZ, Bosanac L, de Turris V, Ruda VM, Lionnet T, Zenklusen D, Guglielmi B et al..  2009.  Imaging transcription in living cells.. Annual Review of Biophysics. 38:173-96.
Nie Z, Li G, Goodwin MP, Gao L, Cyriac J, R Cooks G.  2009.  In situ SIMS analysis and reactions of surfaces prepared by soft landing of mass-selected cations and anions using an ion trap mass spectrometer.. Journal of the American Society for Mass Spectrometry. 20(6):949-56.
Nawrocki EP, Kolbe DL, Eddy SR.  2009.  Infernal 1.0: inference of RNA alignments.. Bioinformatics. 25:1335-7.
Shtengel G, Galbraith JA, Galbraith CG, Lippincott-Schwartz J, Gillette JM, Manley S, Sougrat R, Waterman CM, Kanchanawong P, Davidson MW et al..  2009.  Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure.. Proceedings of the National Academy of Sciences of the United States of America. 106:3125-30.
Liubicich DM, Serano JM, Pavlopoulos A, Kontarakis Z, Protas ME, Kwan E, Chatterjee S, Tran KD, Averof M, Patel NH.  2009.  Knockdown of parhyale ultrabithorax recapitulates evolutionary changes in crustacean appendage morphology.. Proceedings of the National Academy of Sciences of the United States of America. 106:13892-6.
Suzuki Y, Squires DC, Riddiford LM.  2009.  Larval leg integrity is maintained by distal-less and is required for proper timing of metamorphosis in the flour beetle, tribolium castaneum.. Developmental Biology. 326(1):60-7.
Scott MM, Lachey JL, Sternson SM, Lee CE, Elias CF, Friedman JM, Elmquist JK.  2009.  Leptin targets in the mouse brain.. The Journal of Comparative Neurology. 514:518-32.
Tuthill JC.  2009.  Lessons from a compartmental model of a Drosophila neuron.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 29(39):12033-4.
Clack NG, Salaita K, Wu HJ, Groves JT, Gomez EW.  2009.  Like-charge interactions between colloidal particles are asymmetric with respect to sign.. Soft Matter. :1931-6.
Reichow SL, Gonen T.  2009.  Lipid-protein interactions probed by electron crystallography.. Current Opinion in Structural Biology. 19(5):560-5.
Kolbe DL, Eddy SR.  2009.  Local RNA structure alignment with incomplete sequence.. Bioinformatics. 25(10):1236-43.
Borghuis BG, Sterling P, Smith RG.  2009.  Loss of sensitivity in an analog neural circuit.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 29:3045-58.
Jain V.  2009.  Machine learning of image analysis with convolutional networks and topological constraints..
Zimmermann G, Wang L-P, Vaughan AG, Manoli DS, Zhang F, Deisseroth K, Baker BS, Scott MP.  2009.  Manipulation of an innate escape response in Drosophila: photoexcitation of acj6 neurons induces the escape response.. PLoS One. 4(4):e5100.
Simpson JH.  2009.  Mapping and manipulating neural circuits in the fly brain.. Advances in Genetics. 65:79-143.
Song Q, Smith SA, Gao L, Xu W, Volný M, Ouyang Z, R Cooks G.  2009.  Mass selection of ions from beams using waveform isolation in radiofrequency quadrupoles.. Analytical Chemistry. 81(5):1833-40.
Turaga SC, Briggman K, Helmstaedter MN, Denk W, Seung S.  2009.  Maximin affinity learning of image segmentation. Advances in Neural Information Processing Systems 22 (NIPS 2009). 22
Wen Q, Stepanyants A, Elston GN, Grosberg AY, Chklovskii DB.  2009.  Maximization of the connectivity repertoire as a statistical principle governing the shapes of dendritic arbors.. Proceedings of the National Academy of Sciences of the United States of America. 106(30):12536-41.
DeBartolo J, Colubri A, Jha AK, Fitzgerald JE, Freed KF, Sosnick TR.  2009.  Mimicking the folding pathway to improve homology-free protein structure prediction.. Proceedings of the National Academy of Sciences of the United States of America. 106(10):3734-9.
Marvin JS, Looger LL.  2009.  Modulating protein interactions by rational and computational design.. Protein Engineering and Design. :343-66.
Srinivasan DG, Ano L, Davis GK, Stern DL.  2009.  Molecular Basis of Facultative Asexuality in Aphids. Society for Integrative and Comparative Biology. 49:E308-E308.
Chen JZ, Settembre EC, Aoki ST, Zhang X, A Bellamy R, Dormitzer PR, Harrison SC, Grigorieff N.  2009.  Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM.. Proceedings of the National Academy of Sciences of the United States of America. 106(26):10644-8.
Hiruma K, Riddiford LM.  2009.  The molecular mechanisms of cuticular melanization: the ecdysone cascade leading to dopa decarboxylase expression in Manduca sexta.. Insect Biochemistry and Molecular Biology. 39(4):245-53.
Li W, Pan Y, Wang Z, Gong H, Gong Z, Liu L.  2009.  Morphological characterization of single fan-shaped body neurons in Drosophila melanogaster.. Cell and Tissue Research. 336(3):509-19.
Kainmueller D, Lamecker H, Seim H, Zachow S.  2009.  Multi-object segmentation of head bones.. MIDAS Journal.