Biblio

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Author Title Type [ Year(Desc)]
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2014
Vladimirov N, Mu Y, Kawashima T, Bennett DV, Yang C-T, Looger LL, Keller PJ, Freeman J, Ahrens MB.  2014.  Light-sheet functional imaging in fictively behaving zebrafish.. Nature Methods. 11(9):883-4.
Freeman J, Vladimirov N, Kawashima T, Mu Y, Sofroniew NJ, Bennett DV, Rosen J, Yang C-T, Looger LL, Ahrens MB.  2014.  Mapping brain activity at scale with cluster computing.. Nature Methods. 11(9):941-950.
2015
Fosque BF, Sun Y, Dana H, Yang C-T, Ohyama T, Tadross MR, Patel R, Zlatic M, Kim DS, Ahrens MB et al..  2015.  Labeling of active neural circuits in vivo with designed calcium integrators.. Science. 347(6223):755-60.
2016
Dunn TW, Mu Y, Narayan S, Randlett O, Naumann EA, Yang C-T, Schier AF, Freeman J, Engert F, Ahrens MB.  2016.  Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.. eLife.
Quirin S, Vladimirov N, Yang C-T, Peterka DS, Yuste R, Ahrens MB.  2016.  Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy.. Optics Letters. 41(5):855-8.
Kawashima T, Zwart MF, Yang C-T, Mensh BD, Ahrens MB.  2016.  The serotonergic system tracks the outcomes of actions to mediate short-term motor learning.. Cell. 167(4):933-46.
2018
Vladimirov N, Wang C, Höckendorf B, Pujala A, Tanimoto M, Mu Y, Yang C-T, Wittenbach J, Freeman J, Preibisch S et al..  2018.  Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function.. Nature Methods. 15(12):1117-1125.
Piatkevich KD, Jung EE, Straub C, Linghu C, Park D, Suk H-J, Hochbaum DR, Goodwin D, Pnevmatikakis E, Pak N et al..  2018.  A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters.. Nature Chemical Biology.
2019
Wee CLei, Song EYue, Johnson REvan, Ailani D, Randlett O, Kim J-Y, Nikitchenko M, Bahl A, Yang C-T, Ahrens MB et al..  2019.  A bidirectional network for appetite control in larval zebrafish.. Elife. 8
Mu Y, Bennett DV, Rubinov M, Narayan S, Yang C-T, Tanimoto M, Mensh BD, Looger LL, Ahrens MB.  2019.  Glia accumulate evidence that actions are futile and suppress unsuccessful behavior.. Cell. 178(1):27-43.
2020
McRaven C, Tanese D, Zhang L, Yang C-T, Ahrens MB, Emiliani V, Koyama M.  2020.  High-throughput cellular-resolution synaptic connectivity mapping in vivo with concurrent two-photon optogenetics and volumetric Ca2+ imaging. bioRxiv.
Shemesh OA, Linghu C, Piatkevich KD, Goodwin D, Celiker OTunc, Gritton HJ, Romano MF, Gao R, Yu C-CJay, Tseng H-A et al..  2020.  Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator.. Neuron. 107(3):470.