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Main Menu - Block
Labs:
Project Teams:
- Overview
- Anatomy and Histology
- Cryo-Electron Microscopy
- Electron Microscopy
- Flow Cytometry
- Gene Targeting and Transgenics
- Immortalized Cell Line Culture
- Integrative Imaging
- Invertebrate Shared Resource
- Janelia Experimental Technology
- Mass Spectrometry
- Media Prep
- Molecular Genomics
- Primary & iPS Cell Culture
- Project Pipeline Support
- Project Technical Resources
- Quantitative Genomics
- Scientific Computing Software
- Scientific Computing Systems
- Viral Tools
- Vivarium
2008
Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJohn, Hotz H-R, Ceric G, Forslund K, Eddy SR, Sonnhammer ELL et al..
2008. The Pfam protein families database.. Nucleic Acids Research. 36(Database Issue):D281-8.
2014
Eddy SR.
2014. Computational analysis of conserved RNA secondary structure in transcriptomes and genomes.. Annual Review of Biophysics and Biomolecular Structure. 43:433-56.
2015
Chen X, Jung S, Beh LY, Eddy SR, Landweber LF.
2015. Combinatorial DNA rearrangement facilitates the origin of new genes in ciliates.. Genome Biology and Evolution. 7(10):2859-70.
Mo A, Mukamel EA, Davis FP, Luo C, Henry GL, Picard S, Urich MA, Nery JR, Sejnowski TJ, Lister R et al..
2015. Epigenomic signatures of neuronal diversity in the mammalian brain.. Neuron. 86(6):1369-1384.
Finn RD, Clements J, Arndt W, Miller BL, Wheeler TJ, Schreiber F, Bateman A, Eddy SR.
2015. HMMER web server: 2015 update.. Nucleic Acids Research.
Eddy SR.
2015. Homology searches for structural RNAs: from proof of principle to practical use.. RNA. 21(4):605-7.
Nawrocki EP, Burge SW, Bateman A, Daub J, Eberhardt RY, Eddy SR, Floden EW, Gardner PP, Jones TA, Tate J et al..
2015. Rfam 12.0: updates to the RNA families database.. Nucleic Acids Research. 43(Database issue):D130-7.
2016
Hubley R, Finn RD, Clements J, Eddy SR, Jones TA, Bao W, Smit AFA, Wheeler TJ.
2016. The Dfam database of repetitive DNA families.. Nucleic Acids Research. 44(D1):D81-9.
2020
Rivas E, Clements J, Eddy SR.
2020. Estimating the power of sequence covariation for detecting conserved RNA structure.. Bioinformatics. 36(10):3072-76.