Biblio

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2019
Abdelfattah AS, Kawashima T, Singh A, Novak O, Liu H, Shuai Y, Huang Y-C, Campagnola L, Seeman SC, Yu J et al..  2019.  Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.. Science. 365(6454):699-704.
Jradi FM, Lavis LD.  2019.  Chemistry of photosensitive fluorophores for single-molecule localization microscopy.. ACS Chemical Biology. 14(6):1077-90.
Deo C, Sheu S-H, Seo J, Clapham DE, Lavis LD.  2019.  Isomeric tuning yields bright and targetable red Ca indicators.. Journal of the American Chemical Society. 141(35):13734-13738.
Arvin MC, Wokosin DL, Banala S, Lavis LD, Drenan RM.  2019.  Probing nicotinic acetylcholine receptor function in mouse brain slices via laser flash photolysis of photoactivatable nicotine.. Journal of Visualized Experiments : JoVE. (143)
Zheng Q, Ayala AX, Chung I, Weigel AV, Ranjan A, Falco N, Grimm JB, Tkachuk AN, Wu C, Lippincott-Schwartz J et al..  2019.  Rational design of fluorogenic and spontaneously blinking labels for super-resolution imaging.. ACS Central Science. 5(9):1602-1613.
2020
Jonker CTH, Deo C, Zager PJ, Tkachuk AN, Weinstein AM, Rodriguez-Boulan E, Lavis LD, Schreiner R.  2020.  Accurate measurement of fast endocytic recycling kinetics in real time.. Journal of Cell Science. 133(2)
Deo C, Abdelfattah AS, Bhargava HK, Berro AJ, Falco N, Moeyaert B, Chupanova M, Lavis LD, Schreiter ER.  2020.  Bright and tunable far-red chemigenetic indicators.. bioRxiv.
Unger EK, Keller JP, Altermatt M, Liang R, Matsui A, Dong C, Hon OJ, Yao Z, Sun J, Banala S et al..  2020.  Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning.. Cell. 183(7):1986-2002.e26.
Grimm JB, Tkachuk AN, Xie L, Choi H, Mohar B, Falco N, Schaefer K, Patel R, Zheng Q, Liu Z et al..  2020.  A general method to optimize and functionalize red-shifted rhodamine dyes.. Nature Methods.
Ranjan A, Nguyen VQ, Liu S, Wisniewski J, Kim JMin, Tang X, Mizuguchi G, Elalaoui E, Nickels TJ, Jou V et al..  2020.  Live-cell single particle imaging reveals the role of RNA polymerase II in histone H2A.Z eviction.. eLife. 9
Zhang Y, Schroeder LK, Lessard MD, Kidd P, Chung J, Song Y, Benedetti L, Li Y, Ries J, Grimm JB et al..  2020.  Nanoscale subcellular architecture revealed by multicolor three-dimensional salvaged fluorescence imaging.. Nature Methods. 17(2):225-231.
Guthrie D, Herenbrink CKlein, Lycas M, Ku T, Bonifazi A, DeVree B, Mathiasen S, Javitch J, Grimm JB, Lavis LD et al..  2020.  Novel fluorescent ligands enable single-molecule localization microscopy of the dopamine transporter.. ACS Chemical Neuroscience.
Binns TC, Ayala AX, Grimm JB, Tkachuk AN, Castillon GA, Phan S, Zhang L, Brown TA, Liu Z, Adams SR et al..  2020.  Rational design of bioavailable photosensitizers for manipulation and imaging of biological systems.. Cell Chemical Biology. 27(8):1063-72.
2021
Liu B, Stone OJ, Pablo M, J Herron C, Nogueira AT, Dagliyan O, Grimm JB, Lavis LD, Elston TC, Hahn KM.  2021.  Biosensors based on peptide exposure show single molecule conformations in live cells.. Cell. 184(22):5670-5685.
Wang C, Zhang H, Zhang T, Zou X, Wang H, Rosenberger JE, Vannam R, Trout WS, Grimm JB, Lavis LD et al..  2021.  Enabling In Vivo Photocatalytic Activation of Rapid Bioorthogonal Chemistry by Repurposing Silicon-Rhodamine Fluorophores as Cytocompatible Far-Red Photocatalysts.. Journal of the American Chemical Society. 143(28):10793-10803.
Deo C, Abdelfattah AS, Bhargava HK, Berro AJ, Falco N, Farrants H, Moeyaert B, Chupanova M, Lavis LD, Schreiter ER.  2021.  The HaloTag as a general scaffold for far-red tunable chemigenetic indicators.. Nature Chemical Biology.
Lavis LD.  2021.  Live and Let Dye.. Biochemistry.
Lavis LD.  2021.  Open Chemistry: What if we just give everything away? eLife. 10
Kim JMin, Visanpattanasin P, Jou V, Liu S, Tang X, Zheng Q, Li KYu, Snedeker J, Lavis LD, Lionnet T et al..  2021.  Single-molecule imaging of chromatin remodelers reveals role of ATPase in promoting fast kinetics of target search and dissociation from chromatin.. eLife. 10
Nguyen VQ, Ranjan A, Liu S, Tang X, Ling YHin, Wisniewski J, Mizuguchi G, Li KYu, Jou V, Zheng Q et al..  2021.  Spatiotemporal coordination of transcription preinitiation complex assembly in live cells.. Molecular Cell. 81(17):3560-3575.
2022
Kenworthy CA, Haque N, Liou S-H, Chandris P, Wong V, Dziuba P, Lavis LD, Liu W-L, Singer RH, Coleman RA.  2022.  Bromodomains regulate dynamic targeting of the PBAF chromatin remodeling complex to chromatin hubs.. Biophysical Journal. 121(9):1738-1752.
Grimm JB, Lavis LD.  2022.  Caveat fluorophore: an insiders' guide to small-molecule fluorescent labels.. Nature Methods. 19(2):149-58.
Courtney KC, Wu L, Mandal T, Swift M, Zhang Z, Alaghemandi M, Wu Z, Bradberry MM, Deo C, Lavis LD et al..  2022.  The complexin C-terminal amphipathic helix stabilizes the fusion pore open state by sculpting membranes.. Nature Structural & Molecular Biology. 29(2):97-107.
Tang X, Li T, Liu S, Wisniewski J, Zheng Q, Rong Y, Lavis LD, Wu C.  2022.  Kinetic principles underlying pioneer function of GAGA transcription factor in live cells.. Nature Structural and Molecular Biology. 29(7):665-676.
Kumar P, Lavis LD.  2022.  Melding Synthetic Molecules and Genetically Encoded Proteins to Forge New Tools for Neuroscience.. Annual Review of Neuroscience.