Biblio

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Author Title Type [ Year(Desc)]
Filters: Author is Stringer, Carsen  [Clear All Filters]
2025
Gandin V, Kim J, Yang L-Z, Lian Y, Kawase T, Hu A, Rokicki K, Fleishman G, Tillberg P, Castrejon AAguilera et al..  2025.  Deep-tissue transcriptomics and subcellular imaging at high spatial resolution. Science.
Jacob LPL, Bailes SM, Stringer C, Polimeni JR, Lewis LD.  2025.  Functional MRI signals as fast as 1Hz are coupled to brain states and predict spontaneous neural activity. bioRxiv.
Sun W, Winnubst J, Natrajan M, Lai C, Kajikawa K, Michaelos M, Gattoni R, Stringer C, Flickinger D, Fitzgerald JE et al..  2025.  Learning produces an orthogonalized state machine in the hippocampus.. Nature. 640
Du F, Núñez-Ochoa MAngel, Pachitariu M, Stringer C.  2025.  A simplified minimodel of visual cortical neurons. Nat Commun.
Zhang Q, Grødem S, Gracias A, Lensjø KK, Fyhn M, Stringer C, Pachitariu M.  2025.  Spatial predictive coding in visual cortical neurons. bioRxiv.
Qian X, Coleman K, Jiang S, Kriz AJ, Marciano JH, Luo C, Cai C, Manam MDevi, Caglayan E, Otani A et al..  2025.  Spatial transcriptomics reveals human cortical layer and area specification. Nature.
2026
Squires JR, Sun Y, Hoffmann A, Zhang Y, Pan H, Tong F, He Y, Scholten D, Almubarak H, Gurley M et al..  2026.  AI-enabled Spatial Profiling of Circulating Tumor-Immune Ecosystems Predicts Patient Outcomes Across Cancers. bioRxiv.
Baruchin LJ, Cozan M, Mikhniak A, Stringer C, Schröder S.  2026.  Correcting axial-motion artifacts in two-photon calcium imaging with suite2p-in-depth. bioRxiv.
Pachitariu M, Zhong L, Gracias A, Minisi A, Lopez C, Stringer C.  2026.  A critical initialization for biological neural networks. Nature.
Stringer C, Ki C, DelGrosso N, LaFosse P, Zhang Q, Pachitariu M.  2026.  Extracting large-scale neural activity with Suite2p. bioRxiv.
Núñez-Ochoa MAngel, Du F, Zhong L, Baptista S, Michaelos M, Sohn A, Baruchin L, Schröder S, Stringer C, Pachitariu M.  2026.  Linking neural representations to behavior using generalization. bioRxiv.
Syeda A, Núñez-Ochoa MAngel, Zhong L, Pachitariu M, Stringer C.  2026.  Orofacial behaviors, not eye movements, govern neural activity in mouse visual cortex. bioRxiv.
LaFosse PK, Flickinger D, Jaindl G, Drinnenberg A, Grødem S, Lensjø KK, Ramakrishnan C, Siverts L’A, Zeng H, Tasic B et al..  2026.  Raster photostimulation of large-scale neural populations. bioRxiv.
Legorreta EMarquez, Fleishman GM, Hesselink LW, Eddison M, Smeets K, Stringer C, Keller PJ, Narayan S, Chen AB, Mensh BD et al..  2026.  Whole-brain co-mapping of gene expression and neuronal activity at cellular resolution in behaving zebrafish. bioRxiv.