Biblio

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Author Title Type [ Year(Asc)]
Filters: Author is Colonell, Jennifer  [Clear All Filters]
2026
Lakunina A, Socha KZ, Ladd A, Bowen AJ, Chen S, Colonell J, Doshi A, Karsh B, Krumin M, Kulik P et al..  2026.  Neuropixels Opto: Combining high-resolution electrophysiology and optogenetics. Nat Methods.
2025
Trautmann EM, Hesse JK, Stine GM, Xia R, Zhu S, O'Shea DJ, Karsh B, Colonell J, Lanfranchi FF, Vyas S et al..  2025.  Large-scale high-density brain-wide neural recording in nonhuman primates.. Nat Neurosci.
Koukuntla S, DeWeese T, Cheng A, Mildren R, Lawrence A, Graves AR, Colonell J, Harris TD, Charles AS.  2025.  SLAy-ing oversplitting errors in high-density electrophysiology spike sorting. bioRxiv.
Ye Z, Shelton AM, Shaker JR, Boussard J, Colonell J, Birman D, Manavi S, Chen S, Windolf C, Hurwitz C et al..  2025.  Ultra-high-density Neuropixels probes improve detection and identification in neuronal recordings.. Neuron. 113(23)
2024
Chen S, Liu Y, Wang ZAiden, Colonell J, Liu LD, Hou H, Tien N-W, Wang T, Harris T, Druckmann S et al..  2024.  Brain-wide neural activity underlying memory-guided movement.. Cell. 187(3):676-691.e16.
2023
Ye Z, Shelton AM, Shaker JR, Boussard J, Colonell J, Manavi S, Chen S, Windolf C, Hurwitz C, Namima T et al..  2023.  Ultra-high density electrodes improve detection, yield, and cell type specificity of brain recordings.. bioRxiv.
2021
Lee KHyun, Ni Y-L, Colonell J, Karsh B, Putzeys J, Pachitariu M, Harris TD, Meister M.  2021.  Electrode pooling can boost the yield of extracellular recordings with switchable silicon probes.. Nature Communications. 12(1):5245.
Steinmetz NA, Aydın Ç, Lebedeva A, Okun M, Pachitariu M, Bauza M, Beau M, Bhagat J, Böhm C, Broux M et al..  2021.  Neuropixels 2.0: A miniaturized high-density probe for stable, long-term brain recordings.. Science. 372(6539)
2020
Cocanougher BT, Wittenbach JD, Long XSalina, Kohn AB, Norekian TP, Yan J, Colonell J, Masson J-B, Truman JW, Cardona A et al..  2020.  Comparative single-cell transcriptomics of complete insect nervous systems. bioRxiv.
Bogovic JA, Otsuna H, Heinrich L, Ito M, Jeter J, Meissner G, Nern A, Colonell J, Malkesman O, Ito K et al..  2020.  An unbiased template of the Drosophila brain and ventral nerve cord.. PLoS One. 15(12):e0236495.
2019
Gao R, Asano SM, Upadhyayula S, Pisarev I, Milkie DE, Liu T-L, Singh V, Graves AR, Huynh GH, Zhao Y et al..  2019.  Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution.. Science (New York, N.Y.). 363(6424):eaau8302.
2018
Bloss EB, Cembrowski MS, Karsh B, Colonell J, Fetter RD, Spruston N.  2018.  Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites.. Nature Neuroscience. 21(3):353-63.
Bogovic JA, Otsuna H, Heinrich L, Ito M, Jeter J, Meissner GW, Nern A, Colonell J, Malkesman O, Saalfeld S.  2018.  An unbiased template of the Drosophila brain and ventral nerve cord.. bioRxiv.
2017
Long X, Colonell J, Wong AM, Singer RH, Lionnet T.  2017.  Quantitative mRNA imaging throughout the entire Drosophila brain.. Nature Methods. 14(7):703-6.
2016
Bloss EB, Cembrowski MS, Karsh B, Colonell J, Fetter RD, Spruston N.  2016.  Structured dendritic inhibition supports branch-selective integration in CA1 pyramidal cells.. Neuron.
2013
Rah J-C, Bas E, Colonell J, Mishchenko Y, Karsh B, Fetter RD, Myers EW, Chklovskii DB, Svoboda K, Harris TD et al..  2013.  Thalamocortical input onto layer 5 pyramidal neurons measured using quantitative large-scale array tomography.. Frontiers in Neural Circuits. 7:177.
2012
Mütze J, Iyer V, Macklin JJ, Colonell J, Karsh B, sek Z\vek Petrá\, Schwille P, Looger LL, Lavis LD, Harris TD.  2012.  Excitation spectra and brightness optimization of two-photon excited probes.. Biophysical Journal. 102(4):934-44.
2008
Harris TD, Buzby PR, Babcock H, Beer E, Bowers J, Braslavsky I, Causey M, Colonell J, Dimeo J, J Efcavitch W et al..  2008.  Single-molecule DNA sequencing of a viral genome.. Science. 320(5872):106-9.