Biblio

Export 29 results:
Author Title Type [ Year(Asc)]
Filters: Author is Engert, Florian  [Clear All Filters]
2026
Zhang R, Wei Z, How JJ, Nardin M, Narayan S, Kinkhabwala A, Chen W, Lim J-X, Ruetten VMS, Rupashinge A et al..  2026.  A neuron-glia circuit anticipates hypoxia to regulate organismal oxygen use. bioRxiv.
Herrera KJ, Zarghani-Shiraz A, Ahrens MB, Engert F, Fishman MC.  2026.  Synchronization of behavioral and cardiac dynamics in larval zebrafish.. Cell Rep. 45(2):116947.
Chen W, James B, Ruetten VMS, Banala S, Wei Z, Yang X, Fleishman G, Siwanowicz I, Rubinov M, Delahanty J et al..  2026.  Whole-brain, all-optical interrogation of neuronal dynamics underlying gut and vascular interoception in zebrafish. Nature Communications.
Chen W, James B, Ruetten VMS, Banala S, Wei Z, Yang X, Fleishman G, Siwanowicz I, Rubinov M, Delahanty J et al..  2026.  Whole-brain, all-optical interrogation of neuronal dynamics underlying gut and vascular interoception in zebrafish. Nature Communications.
2025
Petkova MD, Januszewski M, Blakely T, Herrera KJ, Schuhknecht GFP, Tiller R, Choi J, Schalek RL, Boulanger-Weill J, Peleg A et al..  2025.  A connectomic resource for neural cataloguing and circuit dissection of the larval zebrafish brain. bioRxiv.
Vohra SK, Eberle M, Boulanger-Weill J, Petkova MD, Schuhknecht GFP, Herrera KJ, Kämpf F, Ruetten VMS, Lichtman JW, Engert F et al..  2025.  Fishexplorer: A multimodal cellular atlas platform for neuronal circuit dissection in larval zebrafish. bioRxiv.
Ruetten VMS, Zheng W, Siwanowicz I, Mensh BD, Eddison M, Hu A, Chi Y, Lemire AL, Guo C, Kadobianskyi M et al..  2025.  Imaging cellular activity simultaneously across all organs of a vertebrate reveals body-wide circuits. bioRxiv.
Chen W, James B, Ruetten VMS, Banala S, Wei Z, Fleishman G, Rubinov M, Fishman MC, Engert F, Lavis LD et al..  2025.  Whole-brain, all-optical interrogation of neuronal dynamics underlying gut interoception in zebrafish. bioRxiv.
2024
Duque M, Chen AB, Hsu E, Narayan S, Rymbek A, Begum S, Saher G, Cohen AE, Olson DE, Li Y et al..  2024.  Ketamine induces plasticity in a norepinephrine-astroglial circuit to promote behavioral perseverance.. Neuron. (113):1-15.
Chen AB, Duque M, Wang VM, Dhanasekar M, Mi X, Rymbek A, Tocquer L, Narayan S, Prober D, Yu G et al..  2024.  Norepinephrine changes behavioral state via astroglial purinergic signaling. Science.
2022
Böhm UL, Kimura Y, Kawashima T, Ahrens MB, Higashijima S-I, Engert F, Cohen AE.  2022.  Voltage imaging identifies spinal circuits that modulate locomotor adaptation in zebrafish.. Neuron.
Böhm UL, Kimura Y, Kawashima T, Ahrens MB, Higashijima S-I, Engert F, Cohen AE.  2022.  Voltage imaging identifies spinal circuits that modulate locomotor adaptation in zebrafish.. Neuron. 110(7):1211-1222.e4.
2021
Chen AB, Deb D, Bahl A, Engert F.  2021.  Algorithms underlying flexible phototaxis in larval zebrafish.. Journal of Experimental Biology. 224(10)
2019
Wee CLei, Song EYue, Johnson REvan, Ailani D, Randlett O, Kim J-Y, Nikitchenko M, Bahl A, Yang C-T, Ahrens MB et al..  2019.  A bidirectional network for appetite control in larval zebrafish.. Elife. 8
2018
Chen X, Mu Y, Hu Y, Kuan AT, Nikitchenko M, Randlett O, Chen AB, Gavornik JP, Sompolinsky H, Engert F et al..  2018.  Brain-wide organization of neuronal activity and convergent sensorimotor transformations in larval zebrafish.. Neuron. 100(4):876-890.e5.
Swinburne IA, Mosaliganti KR, Upadhyayula S, Liu T-L, Hildebrand DGC, Tsai TY-C, Chen A, Al-Obeidi E, Fass AK, Malhotra S et al..  2018.  Lamellar projections in the endolymphatic sac act as a relief valve to regulate inner ear pressure.. eLife. 7
Kiar G, Anderson RJ, Baden A, Badea A, Bridgeford EW, Champion A, Chandrashekar J, Collman F, Duderstadt B, Evans AC et al..  2018.  NeuroStorm: accelerating brain science discovery in the cloud.. arXiv.
Piatkevich KD, Jung EE, Straub C, Linghu C, Park D, Suk H-J, Hochbaum DR, Goodwin D, Pnevmatikakis E, Pak N et al..  2018.  A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters.. Nature Chemical Biology.
2017
Hildebrand DGrant Colb, Cicconet M, Torres RMiguel, Choi W, Quan TMinh, Moon J, Wetzel AWillis, Champion AScott, Graham BJesse, Randlett O et al..  2017.  Whole-brain serial-section electron microscopy in larval zebrafish.. Nature. 545(7654):345-349.
2016
Dunn TW, Mu Y, Narayan S, Randlett O, Naumann EA, Yang C-T, Schier AF, Freeman J, Engert F, Ahrens MB.  2016.  Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.. eLife.
Naumann EA, Fitzgerald JE, Dunn TW, Rihel J, Sompolinsky H, Engert F.  2016.  From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.. Cell. 167(4):947-960.e20.
Dunn TW, Gebhardt C, Naumann EA, Riegler C, Ahrens MB, Engert F, Del Bene F.  2016.  Neural circuits underlying visually evoked escapes in larval zebrafish.. Neuron. 89(3):613-628.
2015
Ahrens MB, Engert F.  2015.  Large-scale imaging in small brains.. Current Opinion in Neurobiology. 32C:78-86.
Randlett O, Wee CL, Naumann EA, Nnaemeka O, Schoppik D, Fitzgerald JE, Portugues R, Lacoste AMB, Riegler C, Engert F et al..  2015.  Whole-brain activity mapping onto a zebrafish brain atlas.. Nature methods. 12(11):1039-46.
2013
Kokel D, Dunn TW, Ahrens MB, Alshut R, Cheung CYan J, Saint-Amant L, Bruni G, Mateus R, van Ham TJ, Shiraki T et al..  2013.  Identification of nonvisual photomotor response cells in the vertebrate hindbrain.. The Journal of Neuroscience. 33(9):3834-43.