Biblio

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2015
Hoskins RA, Carlson JW, Wan KH, Park S, Mendez I, Galle SE, Booth BW, Pfeiffer BD, George RA, Svirskas R et al..  2015.  The Release 6 reference sequence of the Drosophila melanogaster genome.. Genome Research. 25(3):445-58.
Ichinose T, Aso Y, Yamagata N, Abe A, Rubin GM, Tanimoto H.  2015.  Reward signal in a recurrent circuit drives appetitive long-term memory formation.. eLife. 4
2014
Aso Y, Sitaraman D, Ichinose T, Kaun KR, Vogt K, Belliart-Guérin G, Placais P-Y, Robie AA, Yamagata N, Schnaitmann C et al..  2014.  Mushroom body output neurons encode valence and guide memory-based action selection in Drosophila.. eLife. 4
Aso Y, Hattori D, Yu Y, Johnston RM, Iyer NA, Ngo T-T, Dionne H, Abbott L, Axel R, Tanimoto H et al..  2014.  The neuronal architecture of the mushroom body provides a logic for associative learning.. eLife. 3
Vogt K, Schnaitmann C, Dylla KV, Knapek S, Aso Y, Rubin GM, Tanimoto H.  2014.  Shared mushroom body circuits underlie visual and olfactory memories in Drosophila.. eLife. 3:e02395.
Tuthill JC, Nern A, Rubin GM, Reiser MB.  2014.  Wide-field feedback neurons dynamically tune early visual processing.. Neuron. 82(4):887-95.
2013
Tuthill JC, Nern A, Holtz SL, Rubin GM, Reiser MB.  2013.  Contributions of the 12 neuron classes in the fly lamina to motion vision.. Neuron. 79:128-140.
Maisak MS, Haag J, Ammer G, Serbe E, Meier M, Leonhardt A, Schilling T, Bahl A, Rubin GM, Nern A et al..  2013.  A directional tuning map of Drosophila elementary motion detectors.. Nature. 500(7461):212-6.
Takemura S-ya, Bharioke A, Lu Z, Nern A, Vitaladevuni, iv S, Rivlin PK, Katz WT, Olbris DJ, Plaza SM, Winston P et al..  2013.  A visual motion detection circuit suggested by Drosophila connectomics.. Nature. 500(7461):175–81.
2012
Xu T, Rubin GM.  2012.  The effort to make mosaic analysis a household tool.. Development. 139(24):4501-3.
Jenett A, Rubin GM, Ngo T-TB, Shepherd D, Murphy C, Dionne H, Pfeiffer BD, Cavallaro A, Hall D, Jeter J et al..  2012.  A GAL4-driver line resource for Drosophila neurobiology.. Cell Reports. 2(4):991-1001.
Manning L, Heckscher ES, Purice MD, Roberts J, Bennett AL, Kroll JR, Pollard JL, Strader ME, Lupton JR, Dyukareva AV et al..  2012.  A resource for manipulating gene expression and analyzing cis-regulatory modules in the Drosophila CNS.. Cell Reports. 2(4):1002-13.
Liu C, Placais P-Y, Yamagata N, Pfeiffer BD, Aso Y, Friedrich AB, Siwanowicz I, Rubin GM, Preat T, Tanimoto H.  2012.  A subset of dopamine neurons signals reward for odour memory in Drosophila.. Nature. 488(7412):512-6.
Jory A, Estella C, Giorgianni MW, Slattery M, Laverty TR, Rubin GM, Mann RS.  2012.  A survey of 6,300 genomic fragments for cis-regulatory activity in the imaginal discs of Drosophila melanogaster.. Cell Reports. 2(4):1014-24.
Pfeiffer BD, Truman JW, Rubin GM.  2012.  Using translational enhancers to increase transgene expression in Drosophila.. Proceedings of the National Academy of Sciences of the United States of America. 109(17):6626-31.
2011
Nern A, Pfeiffer BD, Svoboda K, Rubin GM.  2011.  Multiple new site-specific recombinases for use in manipulating animal genomes.. Proceedings of the National Academy of Sciences of the United States of America. 108(34):14198-203.
Séjourné J, Placais P-Y, Aso Y, Siwanowicz I, Trannoy S, Thoma V, Tedjakumala SR, Rubin GM, Tchénio P, Ito K et al..  2011.  Mushroom body efferent neurons responsible for aversive olfactory memory retrieval in Drosophila.. Nature Neuroscience. 14(7):903-10.
2010
Pfeiffer BD, Ngo T-TB, Hibbard KL, Murphy C, Jenett A, Truman JW, Rubin GM.  2010.  Refinement of tools for targeted gene expression in Drosophila.. Genetics. 186(2):735-55.
2008
Pfeiffer BD, Jenett A, Hammonds AS, Ngo T-TB, Misra S, Murphy C, Scully A, Carlson JW, Wan KH, Laverty TR et al..  2008.  Tools for neuroanatomy and neurogenetics in Drosophila.. Proceedings of the National Academy of Sciences of the United States of America. 105:9715-20.
2007
Harmon C, Ahammad P, Hammonds AS, Weiszmann R, Celniker SE, Sastry S, Rubin GM.  2007.  Comparative analysis of spatial patterns of gene expression in Drosophila Melanogaster imaginal discs.. International Conference on Research in Computational Molecular Biology.
Qin X, Ahn S, Speed TP, Rubin GM.  2007.  Global analyses of mRNA translational control during early Drosophila embryogenesis.. Genome Biology. 8(4):R63.
Tomancak P, Berman BP, Beaton A, Weiszmann R, Kwan E, Hartenstein V, Celniker SE, Rubin GM.  2007.  Global analysis of patterns of gene expression during Drosophila embryogenesis.. Genome Biology. 8(7):R145.
2006
Rubin GM.  2006.  Janelia Farm: an experiment in scientific culture.. Cell. 125(2):209-12.
2005
Ahammad P, Harmon C, Hammonds AS, Sastry S, Rubin GM.  2005.  Joint nonparametric alignment for analyzing spatial gene expression patterns of Drosophila imaginal discs.. IEEE Conference on Computer Vision and Pattern Recognition. 2:755-60.
2002
Spellman PT, Rubin GM.  2002.  Evidence for large domains of similarly expressed genes in the Drosophila genome.. Journal of Biology. 1(1):5.