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Author Title Type [ Year(Asc)]
2025
Puls OF, Aaron JS, Quarles EK, Khuon S, Eisenman LR, Kamaid A, Malacrida L, Chew T-L.  2025.  Redefining colocalization analysis with a novel Phasor Mixing Coefficient.. J Cell Sci.
Athif M, Malmberg S, Mount R, Patel K, Wang Y, Shaw D, Ravasio C, Xiao S, Rillosi E, Tseng H-A et al..  2025.  Relative phase of membrane potential theta oscillations between individual hippocampal neurons code space. bioRxiv.
Prakash K, Baddeley D, Eggeling C, Fiolka R, Heintzmann R, Manley S, Radenovic A, Shroff H, Smith C, Schermelleh L.  2025.  Resolution in super-resolution microscopy - facts, artifacts, technological advancements and biological applications. J Cell Sci. 138(10)
Liu Y, Stergiopoulou V, Chuah J, Bezzam E, Both G-J, Unser M, Sage D, Dong J.  2025.  Revisiting PSF models: Unifying framework and high-performance implementation.. J Microsc.
Rahmoon MA, Hobson CM, Chew T-L, Aaron JS.  2025.  A roadmap for the widespread adoption of frugal microscopes.. Nat Commun. 16(1):8241.
Bushey D, Shiozaki H, Shuai Y, Zheng J, Jayaraman V, Hasseman JP, Kolb I, Team GENIEProject, Turner GC.  2025.  RubyACRs Enable Red-Shifted Optogenetic Inhibition in Freely Behaving Drosophila. eLife.
Roche B, Claudi B, Cunrath O, Bleck CKE, Antelo-Varela M, Li J, Bumann D.  2025.  A Salmonella subset exploits erythrophagocytosis to subvert SLC11A1-imposed iron deprivation. Cell Host & Microbe. 33:632-642.e4.
Preibisch S, Innerberger M, León-Periñán D, Karaiskos N, Rajewsky N.  2025.  Scalable image-based visualization and alignment of spatial transcriptomics datasets. Cell Syst.
Aggarwal A, Baker HA, Dürst CD, Chen I-W, de Chambrier P, Gonzales JMarie, Marvin JS, Vandal M, Lundberg T, Sakoi K et al..  2025.  A sensitive orange fluorescent calcium ion indicator for imaging neural activity. bioRxiv.
Berg S, Beckett IR, Costa M, Schlegel P, Januszewski M, Marin EC, Nern A, Preibisch S, Qiu W, Takemura S-ya et al..  2025.  Sexual dimorphism in the complete connectome of the Drosophila male central nervous system. bioRxiv.
Deutsch D, Matsliah A, Wang K, Dorkenwald S, Mondal A, Burke A, Hebditch J, Gager J, Yu S-C, Sterling A et al..  2025.  Sexually-dimorphic neurons in the Drosophila whole-brain connectome. Research Square.
Chai CM, Morrow C, Parikh DD, von Reyn CR, Leonardo A, Card GM.  2025.  Shorter-duration escapes driven by Drosophila giant interneurons promote survival during predation. Proc Biol Sci.
Lustig B, Wang Y, Romani S, Pastalkova E, Lee AK.  2025.  Signatures of remote planning in hippocampal replay. bioRxiv.
Du F, Núñez-Ochoa MAngel, Pachitariu M, Stringer C.  2025.  A simplified minimodel of visual cortical neurons. Nat Commun.
Bibby S, Jung J, Low YShang, Amarilla AA, Newton ND, Scott CAP, Balk J, Ting YTian, Freney ME, Liang B et al..  2025.  A single residue in the yellow fever virus envelope protein modulates virion architecture and antigenicity.. Nat Commun. 16(1):8449.
Uchigashima M, Iguchi R, Fujii K, Shiku K, Kumar P, Liu X, Isogai M, Hoshino C, Abe M, Nozumi M et al..  2025.  Single-cell synaptome mapping of endogenous protein subpopulations in mammalian brain.. Nat Commun. 16(1):9705.
Ehrhardt E, Whitehead SC, Namiki S, Minegishi R, Siwanowicz I, Feng K, Otsuna H, Team FLProject, Meissner GW, Stern D et al..  2025.  Single-cell type analysis of wing premotor circuits in the ventral nerve cord of Drosophila melanogaster. eLife.
Wong VC, Walpita D, Liu Z, O'Shea EK.  2025.  Single-Particle Tracking of AMPA Receptor-Containing Vesicles. Bio-protocol. 15(11)
Furman D, Auwerx J, Bulteau A-L, Church G, Couturaud V, Crabbe L, Davies KJA, Decottignies A, Gladyshev VN, Kennedy BK et al..  2025.  Skin health and biological aging.. Nat Aging.
Koukuntla S, DeWeese T, Cheng A, Mildren R, Lawrence A, Graves AR, Colonell J, Harris TD, Charles AS.  2025.  SLAy-ing oversplitting errors in high-density electrophysiology spike sorting. bioRxiv.
Lee SSoo, Liu Q, Cheng AHR, Kim DWon, Boudreau DM, Mehta A, Keles MF, Fejfer R, Palmer I, Park KH et al..  2025.  Sleep need-dependent plasticity of a thalamic circuit promotes homeostatic recovery sleep.. Science. 388(6753):eadm8203.
Zhang Q, Grødem S, Gracias A, Lensjø KK, Fyhn M, Stringer C, Pachitariu M.  2025.  Spatial predictive coding in visual cortical neurons. bioRxiv.
Voigts J, Kanitscheider I, Miller NJ, Toloza EHS, Newman JP, Fiete IR, Harnett MT.  2025.  Spatial reasoning via recurrent neural dynamics in mouse retrosplenial cortex. Nat Neurosci. 28(6):1293-1299.
Qian X, Coleman K, Jiang S, Kriz AJ, Marciano JH, Luo C, Cai C, Manam MDevi, Caglayan E, Otani A et al..  2025.  Spatial transcriptomics reveals human cortical layer and area specification. Nature.
Meissner GW, Vannan A, Jeter J, Close K, Depasquale GM, Dorman Z, Forster K, Beringer JAnne, Gibney TV, Hausenfluck JH et al..  2025.  A split-GAL4 driver line resource for Drosophila neuron types.