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Fortini ME, Rubin GM.  1990.  Analysis of cis-acting requirements of the Rh3 and Rh4 genes reveals a bipartite organization to rhodopsin promoters in Drosophila melanogaster.. Genes & Development. 4(3):444-63.
Breimann L, Bahry E, Zouinkhi M, Kolyvanov K, Street LAnnika, Preibisch S, Ercan S.  2024.  Analysis of developmental gene expression using smFISH and in silico staging of C. elegans embryos. bioRxiv.
Zhang C, Cantara W, Jeon Y, Musier-Forsyth K, Grigorieff N, Lyumkis D.  2018.  Analysis of discrete local variability and structural covariance in macromolecular assemblies using Cryo-EM and focused classification.. Ultramicroscopy. 203:170.
Xu T, Rubin GM.  1993.  Analysis of genetic mosaics in developing and adult Drosophila tissues.. Development. 117(4):1223-37.
Hattne J, Shi D, Glynn C, Zee C-T, Gallagher-Jones M, Martynowycz MW, Rodriguez JA, Gonen T.  2018.  Analysis of global and site-specific radiation damage in cryo-EM.. Structure (London, England : 1993). 26(5):759-66.
Aaron JS, Chew T-L.  2018.  Analysis of image similarity and relationship.. Basic Confocal Microscopy. :309-33.
Man B, Kim E, Vadlakonda A, Stern DL, Crown N.  2024.  Analysis of meiotic recombination in Drosophila simulans shows heterozygous inversions do not cause an interchromosomal effect. Genetics.
Mitra K, Lippincott-Schwartz J.  2010.  Analysis of mitochondrial dynamics and functions using imaging approaches.. Current protocols in cell biology / editorial board, Juan S. Bonifacino ... [et al.]. Chapter 4:Unit4.25.1-21.
Karess RE, Rubin GM.  1984.  Analysis of P transposable element functions in Drosophila.. Cell. 38(1):135-46.
Chang C-L, Liou J.  2019.  Analysis of phosphatidylinositol transfer at ER-PM junctions in receptor-stimulated live cells.. Methods in Molecular Biology. 1949:1-11.
Amat F, Comolli LR, Nomellini JF, Moussavi F, Downing KH, Smit J, Horowitz M.  2010.  Analysis of the intact surface layer of Caulobacter crescentus by cryo-electron tomography.. Journal of Bacteriology. 192(22):5855-65.
Gao L, Tian L-xin, Guo Y.  2009.  [Analysis on acupuncture literature in Science Citation Index (SCI) periodicals in 2007].. Zhongguo Zhen Jiu = Chinese Acupuncture & Moxibustion. 29(6):504-7.
Scheffer LK.  2018.  Analysis tools for large connectomes.. Frontiers in Neural Circuits. 12:85.
Plaza SM, Funke J.  2018.  Analyzing image segmentation for connectomics.. Frontiers in Neural Circuits. 12:102.
Jenett A, Wolff T, Nern A., Pfeiffer BD, Ngo T., Murphy C., Long F., Peng H., Rubin GM.  2010.  Anatomic analysis of Gal4 expression patterns of the Rubin line collection: the central complex.. Journal of Neurogenetics. 24:71-2.
Stagkourakis S, Spigolon G, Marks M, Feyder M, Kim J, Perona P, Pachitariu M, Anderson DJ.  2023.  Anatomically distributed neural representations of instincts in the hypothalamus.. bioRxiv.
Jackson J, Smith JB, Lee AK.  2020.  The anatomy and physiology of claustrum-cortex interactions.. Annual Review of Neuroscience. 43:231-47.
Gale SD, Perkel DJ.  2010.  Anatomy of a songbird basal ganglia circuit essential for vocal learning and plasticity.. Journal of Chemical Neuroanatomy. 39(2):124-31.
Lee D, Shtengel G, Osborne JE, Lee AK.  2014.  Anesthetized- and awake-patched whole-cell recordings in freely moving rats using UV-cured collar-based electrode stabilization.. Nature Protocols. 9(12):2784-95.
Turner-Evans D, Wegener S, Rouault H, Franconville R, Wolff T, Seelig JD, Druckmann S, Jayaraman V.  2017.  Angular velocity integration in a fly heading circuit.. eLife. 6
Parag T, Tschopp F, Grisaitis W, Turaga SC, Zhang X, Matejek B, Kamentsky L, Lichtman JW, Pfister H.  2017.  Anisotropic EM Segmentation by 3D Affinity Learning and Agglomeration. CoRR. abs/1707.08935
Xie J, Zhao T, Lee T, Myers E, Peng H.  2011.  Anisotropic path searching for automatic neuron reconstruction.. Medical Image Analysis. 15:680-9.
Zhang W, Cheng LE, Kittelmann M, Li J, Petkovic M, Cheng T, Jin P, Guo Z, Göpfert MC, Jan LYeh et al..  2015.  Ankyrin Repeats Convey Force to Gate the NOMPC Mechanotransduction Channel.. Cell. 162(6):1391-403.
Nawrocki EP.  2014.  Annotating functional RNAs in genomes using infernal.. Methods in Molecular Biology. 1097:163-97.
Plaza SM, Parag T, Huang G, Olbris DJ, Saunders MA, Rivlin PK.  2014.  Annotating synapses in large EM datasets.. arXiv. :arXiv:1409.1801[q-bio.QM].