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Li F, Lindsey JW, Marin EC, Otto N, Dreher M, Dempsey G, Stark I, Bates AS, Pleijzier MWilliam, Schlegel P et al..  2020.  The connectome of the adult mushroom body provides insights into function.. eLife. 9
Hulse BK, Haberkern H, Franconville R, Turner-Evans DB, Takemura S-ya, Wolff T, Noorman M, Dreher M, Dan C, Parekh R et al..  2021.  A connectome of the central complex reveals network motifs suitable for flexible navigation and context-dependent action selection.. eLife. 10
Takemura S-ya.  2015.  Connectome of the fly visual circuitry.. Microscopy. 64(1):37-44.
Takemura S-ya, Hayworth KJ, Huang GB, Januszewski M, Lu Z, Marin EC, Preibisch S, C Xu S, Bogovic J, Champion AS et al..  2023.  A Connectome of the Male Drosophila Ventral Nerve Cord. bioRxiv.
Meinertzhagen IA.  2016.  Connectome studies on Drosophila: a short perspective on a tiny brain.. Journal of Neurogenetics. 30(2):62-8.
Lappalainen JK, Tschopp FD, Prakhya S, McGill M, Nern A, Shinomiya K, Takemura S-ya, Gruntman E, Macke JH, Turaga SC.  2023.  Connectome-constrained deep mechanistic networks predict neural responses across the fly visual system at single-neuron resolution. bioRxiv.
Mi L, Xu R, Prakhya S, Lin A, Shavit N, Samuel A, Turaga SC.  2022.  Connectome-constrained Latent Variable Model of Whole-Brain Neural Activity. International Conference on Learning Representations.
Nern A, Loesche F, Takemura S-ya, Burnett LE, Dreher M, Gruntman E, Hoeller J, Huang GB, Januszewski M, Klapoetke NC et al..  2024.  Connectome-driven neural inventory of a complete visual system. bioRxiv.
Rivlin PK, Januszewski M, Longden KD, Neace E, Scheffer LK, Ordish C, Clements J, Phillips E, Smith N, Takemura S et al..  2024.  Connectomic Analysis of Mitochondria in the Central Brain of Drosophila. bioRxiv.
Helmstaedter M, Briggman KL, Turaga SC, Jain V, H Seung S, Denk W.  2013.  Connectomic reconstruction of the inner plexiform layer in the mouse retina.. Nature. 500(7461):168-74.
Garner D, Kind E, Nern A, Houghton L, Zhao A, Sancer G, Rubin GM, Wernet MF, Kim SSoo.  2023.  Connectomic reconstruction predicts the functional organization of visual inputs to the navigation center of the brain.. bioRxiv.
Marin EC, Büld L, Theiss M, Sarkissian T, Roberts RJV, Turnbull R, Tamimi IFM, Pleijzier MW, Laursen WJ, Drummond N et al..  2020.  Connectomics analysis reveals first-, second-, and third-order thermosensory and hygrosensory neurons in the adult Drosophila brain.. Current Biology. 30(16):3167-82.
Lippincott-Schwartz J, Freed EO, van Engelenburg SB.  2017.  A consensus view of ESCRT-mediated Human Immunodeficiency Virus Type 1 abscission.. Annual Review of Virology. 4(1):309-25.
Lee Y-J, Yang C-P, Miyares RL, Huang Y-F, He Y, Ren Q, Chen H-M, Kawase T, Ito M, Otsuna H et al..  2020.  Conservation and divergence of related neuronal lineages in the central brain.. eLife. 9
Gerhard S, Andrade I, Fetter RD, Cardona A, Schneider-Mizell CM.  2017.  Conserved neural circuit structure across Drosophila larva development revealed by comparative connectomics.. eLife. 6:e29089.
Tian L, Holmgren RA, Matouschek A.  2005.  A conserved processing mechanism regulates the activity of transcription factors Cubitus interruptus and NF-kappaB.. Nature Structural & Molecular Biology. 12(12):1045-53.
Frankel N, Wang S, Stern DL.  2012.  Conserved regulatory architecture underlies parallel genetic changes and convergent phenotypic evolution.. Proc Natl Acad Sci U S A. 109(51):20975-9.
Tamvacakis AN, Lillvis JL, Sakurai A, Katz PS.  2022.  The Consistency of Gastropod Identified Neurons Distinguishes Intra-Individual Plasticity From Inter-Individual Variability in Neural Circuits.. Frontiers in Behavioral Neuroscience. 16:855235.
Butler VJ, Branicky R, Yemini E, Liewald JF, Gottschalk A, Kerr RA, Chklovskii DB, Schafer WR.  2015.  A consistent muscle activation strategy underlies crawling and swimming in Caenorhabditis elegans.. Journal of the Royal Society Interface. 12(102):20140963.
Litwin-Kumar A, Turaga SC.  2019.  Constraining computational models using electron microscopy wiring diagrams.. Current Opinion in Neurobiology. 58:94-100.
Luo SD, Baker BS.  2015.  Constraints on the evolution of a doublesex target gene arising from doublesex's pleiotropic deployment.. Proceedings of the National Academy of Sciences of the United States of America. 112(8):E852-61.
Wu Y, Whiteus C, C Xu S, Hayworth KJ, Weinberg RJ, Hess HF, De Camilli P.  2017.  Contacts between the endoplasmic reticulum and other membranes in neurons.. Proceedings of the National Academy of Sciences of the United States of America. 114(24):E4859-67.
Parag T, Chakraborty A, Plaza SM.  2014.  A context-aware delayed agglomeration framework for EM segmentation.. arXiv. :arXiv:1406.1476[cs.CV].
Oram TB, Card GM.  2022.  Context-dependent control of behavior in Drosophila.. Current Opinion in Neurobiology. 73:102523.
Lasman L, Krupalnik V, Viukov S, Mor N, Aguilera-Castrejon A, Schneir D, Bayerl J, Mizrahi O, Peles S, Tawil S et al..  2020.  Context-dependent functional compensation between Ythdf mA reader proteins.. Genes Dev. 34(19-20):1373-1391.