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Author Title Type [ Year(Asc)]
2024
Vaxenburg R, Siwanowicz I, Merel J, Robie AA, Morrow C, Novati G, Stefanidi Z, Card GM, Reiser MB, Botvinick MM et al..  2024.  Whole-body simulation of realistic fruit fly locomotion with deep reinforcement learning. bioRxiv.
Hao S, Lee YJin, Goldfajn NBenhamou, Flores E, Liang J, Fuehrer H, Demmerle J, Lippincott-Schwartz J, Liu Z, Sukenik S et al..  2024.  YAP condensates are highly organized hubs. iScience. :109927.
2023
Nikolaev YA, Ziolkowski LH, Pang S, Li W-P, Feketa VV, C. Xu S, Gracheva EO, Bagriantsev SN.  2023.  3D architecture and a bi-cellular mechanism of touch detection in mechanosensory corpuscle. Science Advances. 9(37):eadi4147.
Proskurin M, Manakov M, Karpova AY.  2023.  ACC neural ensemble dynamics are structured by strategy prevalence. eLife.
Selfe JS, Steyn TJS, Shorer EF, Burman RJ, Düsterwald KM, Abdelfattah AS, Schreiter ER, Newey SE, Akerman CJ, Raimondo JV.  2023.  All-optical reporting of chloride ion driving force in the nervous system. bioRxiv.
Selfe JS, Steyn TJS, Shorer EF, Burman RJ, Düsterwald KM, Abdelfattah AS, Schreiter ER, Newey SE, Akerman CJ, Raimondo JV.  2023.  All-optical reporting of inhibitory receptor driving force in the nervous system.. bioRxiv.
Stagkourakis S, Spigolon G, Marks M, Feyder M, Kim J, Perona P, Pachitariu M, Anderson DJ.  2023.  Anatomically distributed neural representations of instincts in the hypothalamus.. bioRxiv.
Bharathan NKrishnan, Giang W, Hoffman CL, Aaron JS, Khuon S, Chew T-L, Preibisch S, Trautman ET, Heinrich L, Bogovic J et al..  2023.  Architecture and dynamics of a desmosome-endoplasmic reticulum complex.. Nature Cell Biology. 25(6):823-835.
Chen C-L, Aymanns F, Minegishi R, Matsuda VDV, Talabot N, Günel S, Dickson BJ, Ramdya P.  2023.  Ascending neurons convey behavioral state to integrative sensory and action selection centers in the brain. Nature Neuroscience.
Malin-Mayor C, Hirsch P, Guignard L, McDole K, Wan Y, Lemon WC, Kainmueller D, Keller PJ, Preibisch S, Funke J.  2023.  Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations.. Nature Biotechnology. 41(1):44-49.
Santos ÁDos, Rollins DE, Hari-Gupta Y, McArthur H, Du M, Ru SYong Zi, Pidlisna K, Stranger A, Lorgat F, Lambert D et al..  2023.  Autophagy receptor NDP52 alters DNA conformation to modulate RNA polymerase II transcription.. Nature Communications. 14(1):2855.
Liessem S, Held M, Bisen RS, Haberkern H, Lacin H, Bockemühl T, Ache JM.  2023.  Behavioral state-dependent modulation of insulin-producing cells in Drosophila.. Current Biology. 33(3):449.
Thuma TBT, Bogovic JA, Gunton KB, Jimenez H, Negreiros B, Pulido JS.  2023.  The big warp: Registration of disparate retinal imaging modalities and an example overlay of ultrawide-field photos and en-face OCTA images.. PLoS One. 18(4):e0284905.
Manubens-Gil L, Zhou Z, Chen H, Ramanathan A, Liu X, Liu Y, Bria A, Gillette T, Ruan Z, Yang J et al..  2023.  BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets.. Nature Methods. 20(6)
Mamiya A, Sustar A, Siwanowicz I, Qi Y, Lu T-C, Gurung P, Chen C, Phelps JS, Kuan AT, Pacureanu A et al..  2023.  Biomechanical origins of proprioceptor feature selectivity and topographic maps in the Drosophila leg.. Neuron.
Yoo J, Dombrovski M, Mirshahidi P, Nern A, LoCascio SA, S Zipursky L, Kurmangaliyev YZ.  2023.  Brain wiring determinants uncovered by integrating connectomes and transcriptomes.. Current Biology. 33(18):3998-3998.
Chen S, Liu Y, Wang Z, Colonell J, Liu LD, Hou H, Tien N-W, Wang T, Harris T, Druckmann S et al..  2023.  Brain-wide neural activity underlying memory-guided movement. bioRxiv.
Chiu H, Robie AA, Branson KM, Vippa T, Epstein S, Rubin GM, Anderson DJ, Schretter CE.  2023.  Cell type-specific contributions to a persistent aggressive internal state in female Drosophila. bioRxiv.
Majumder S, Hirokawa K, Yang Z, Paletzki R, Gerfen CR, Fontolan L, Romani S, Jain A, Yasuda R, Inagaki HK.  2023.  Cell-type-specific plasticity shapes neocortical dynamics for motor learning. bioRxiv.
Cartwright HN, Hobson CM, Chew T-L, Reiche MA, Aaron JS.  2023.  The challenges and opportunities of open-access microscopy facilities.. Journal of Microscopy.
Liu G, Ruan X, Milkie DE, Görlitz F, Mueller M, Hercule W, Kililea A, Betzig E, Upadhyayula S.  2023.  Characterization, Comparison, and Optimization of Lattice Light Sheets. Science Advances.
Winans AM, Friedmann D, Stanley C, Xiao T, Liu T-L, Chang CJ, Isacoff EY.  2023.  Ciliary localization of a light-activated neuronal GPCR shapes behavior.. Proceedings of the National Academy of Sciences of the USA. 120(43):e2311131120.
Shiozaki HM, Wang K, Lillvis JL, Xu M, Dickson BJ, Stern DL.  2023.  Combinatorial circuit dynamics orchestrate flexible motor patterns in Drosophila.. bioRxiv.
Zhu J, Boivin J-C, Pang S, C Xu S, Lu Z, Saalfeld S, Hess HF, Ohyama T.  2023.  Comparative connectomics and escape behavior in larvae of closely related Drosophila species.. Current Biology.
Erginkaya M, Cruz T, Brotas M, Steck K, Nern A, Torrão F, Varela N, Bock D, Reiser M, M Chiappe E.  2023.  A competitive disinhibitory network for robust optic flow processing in Drosophila. bioRxiv.