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Ahmed M, Rajagopalan AE, Pan Y, Li Y, Williams DL, Pedersen EA, Thakral M, Previero A, Close KC, Christoforou CP et al..  2023.  Input density tunes Kenyon cell sensory responses in the Drosophila mushroom body.. Current Biology.
Ahn K-C, Bernier BE, Harnett MT, Morikawa H.  2010.  IP3 receptor sensitization during in vivo amphetamine experience enhances NMDA receptor plasticity in dopamine neurons of the ventral tegmental area.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 30:6689-99.
Ahrens MB, Linden JF, Sahani M.  2008.  Nonlinearities and contextual influences in auditory cortical responses modeled with multilinear spectrotemporal methods.. The Journal of Neuroscience. 28(8):1929-42.
Ahrens MB, Sahani M.  2011.  Observers exploit stochastic models of sensory change to help judge the passage of time.. Current Biology. 21(3):200-6.
Ahrens MB.  2024.  Closing the Experiment-Modeling-Perturbation Loop in Whole-Brain Neuroscience.. Neurosci Bull.
Ahrens MB, Li JM, Orger MB, Robson DN, Schier AF, Engert F, Portugues R.  2012.  Brain-wide neuronal dynamics during motor adaptation in zebrafish.. Nature. 485(7399):471-7.
Ahrens MB, Engert F.  2015.  Large-scale imaging in small brains.. Current Opinion in Neurobiology. 32C:78-86.
Ahrens MB*, Huang KHua*, Narayan S, Mensh BD, Engert F.  2013.  Two-photon calcium imaging during fictive navigation in virtual environments.. Frontiers in Neural Circuits. 7:104.
Ahrens MB, Paninski L, Sahani M.  2008.  Inferring input nonlinearities in neural encoding models.. Network. 19(1):35-67.
Ahrens MB, Huys QJM, Paninski L.  2006.  Large-scale biophysical parameter estimation in single neurons via constrained linear regression.. Neural Information Processing Systems. 18
Ahrens MB, Orger MB, Robson DN, Li JM, Keller PJ.  2013.  Whole-brain functional imaging at cellular resolution using light-sheet microscopy.. Nature Methods. 10(5):413-20.
Ahrens MB.  2019.  Zebrafish neuroscience: Using artificial neural networks to help understand brains.. Current Biology. 29(21):R1138-R1140.
Ahrens MB, Khakh BS, Poskanzer KE.  2024.  Astrocyte Calcium Signaling. Cold Spring Harb Perspect Biol.
Ai M, Mills H, Kanai M, Lai J, Deng J, Schreiter E, Looger L, Neubert T, Suh G.  2015.  Green-to-red photoconversion of GCaMP.. PLoS One. 10(9):e0138127.
Aitchison L, Adam V, Turaga SC.  2018.  Discrete flow posteriors for variational inference in discrete dynamical systems.. arXiv. :1805.10958.
Aitchison L, Russell L, Packer AM, Yan J, Castonguay P, Häusser M, Turaga SC.  2017.  Model-based Bayesian inference of neural activity and connectivity from all-optical interrogation of a neural circuit. Advances in Neural Information Processing Systems.
Aitchison L, Russell L, Packer AM, Yan J, Castonguaye P, Häusser M, Turaga SC.  2017.  Model-based Bayesian inference of neural activity and connectivity from all-optical interrogation of a neural circuit.. 31st Conference on Neural Information Processing Systems (NIPS 2017).
Akam T, Lustig A, Rowland JM, Kapanaiah SKt, Esteve-Agraz J, Panniello M, Márquez C, Kohl MM, Kätzel D, Costa RM et al..  2022.  Open-source, Python-based, hardware and software for controlling behavioural neuroscience experiments.. eLife. 11
Akam T, Lustig A, Rowland J, Kapanaiah SKT, Esteve-Agraz J, Panniello M, Marquez C, Kohl M, Kätzel D, Costa RM et al..  2021.  pyControl: Open source, Python based, hardware and software for controlling behavioural neuroscience experiments. bioRxiv.
Akerboom J, Calderón NCarreras, Tian L, Wabnig S, Prigge M, Tolö J, Gordus A, Orger MB, Severi KE, Macklin JJ et al..  2013.  Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.. Frontiers in Molecular Neuroscience. 6:2.
Akerboom J, Turnbull AP, Hargreaves D, Fisher M, de Geus D, Sedelnikova SE, Berrisford JM, Baker PJ, Verhees CH, van der Oost J et al..  2003.  Purification, crystallization and preliminary crystallographic analysis of phosphoglucose isomerase from the hyperthermophilic archaeon Pyrococcus furiosus.. Acta Crystallographica. Section D, Biological Crystallography. 59:1822-3.
Akerboom J.  2007.  Functional analysis of thermostable proteins involved in carbohydrate metabolism.. :174.
Akerboom J, Rivera JDVélez, Guilbe MMRodrígu, Malavé ECAlfaro, Hernandez HH, Tian L, S Hires A, Marvin JS, Looger LL, Schreiter ER.  2009.  Crystal structures of the GCaMP calcium sensor reveal the mechanism of fluorescence signal change and aid rational design.. The Journal of Biological Chemistry. 284:6455-64.
Akerboom J, Chen T-W, Wardill TJ, Marvin JS, Mutlu S, Caldero NCarreras, Esposti F, Borghuis BG, Sun XRichard, Gordus A et al..  2012.  Optimization of a GCaMP calcium indicator for neural activity imaging.. The Journal of Neuroscience. 32:13819-40.
Akiyoshi B, Sarangapani KK, Powers AF, Nelson CR, Reichow SL, Arellano-Santoyo H, Gonen T, Ranish JA, Asbury CL, Biggins S.  2010.  Tension directly stabilizes reconstituted kinetochore-microtubule attachments.. Nature. 468(7323):576-9.