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Journal Article
Deb D, Both G-J, Bezzam E, Kohli A, Yang S, Chaware A, Allier C, Cai C, Anderberg G, M. Eybposh H et al..  2025.  Chromatix: a differentiable, GPU-accelerated wave-optics library. bioRxiv.
Pujala A, Koyama M.  2019.  Chronology-based architecture of descending circuits that underlie the development of locomotor repertoire after birth.. eLife. 8
Tabler JM, Rigney MM, Berman GJ, Gopalakrishnan S, Heude E, Al-Lami HAdel, Yannakoudakis BZ, Fitch RD, Carter CM, Vokes SA et al..  2017.  Cilia-mediated Hedgehog signaling controls form and function in the mammalian larynx.. eLife. 6
Winans AM, Friedmann D, Stanley C, Xiao T, Liu T-L, Chang CJ, Isacoff EY.  2023.  Ciliary localization of a light-activated neuronal GPCR shapes behavior.. Proceedings of the National Academy of Sciences of the USA. 120(43):e2311131120.
Wan Y, Almeida AD, Rulands S, Chalour N, Muresan L, Wu Y, Simons BD, He J, Harris WA.  2016.  The ciliary marginal zone of the zebrafish retina: clonal and time-lapse analysis of a continuously growing tissue.. Development (Cambridge, England). 143(7):1099-107.
Wang F, Wang K, Forknall N, Parekh R, Dickson BJ.  2020.  Circuit and behavioral mechanisms of sexual rejection by drosophila females.. Current Biology. 30(19)
Fushiki A, Zwart MF, Kohsaka H, Fetter RD, Cardona A, Nose A.  2016.  A circuit mechanism for the propagation of waves of muscle contraction in Drosophila.. eLife. 5
Koyama M, Minale F, Shum J, Nishimura N, Schaffer CB, Fetcho JR.  2016.  A circuit motif in the zebrafish hindbrain for a two alternative behavioral choice to turn left or right.. Elife. 5
Watanabe K, Chiu H, Pfeiffer BD, Wong AM, Hoopfer ED, Rubin GM, Anderson DJ.  2017.  A circuit node that integrates convergent input from neuromodulatory and social behavior-promoting neurons to control aggression in Drosophila.. Neuron. 95(5):1112-1128.e7.
Baltruschat L, Prisco L, Ranft P, J Lauritzen S, Fiala A, Bock DD, Tavosanis G.  2021.  Circuit reorganization in the Drosophila mushroom body calyx accompanies memory consolidation.. Cell Reports. 34(11):108871.
Eschbach C, Fushiki A, Winding M, Afonso B, Andrade IV, Cocanougher BT, Eichler K, Gepner R, Si G, Valdes-Aleman J et al..  2021.  Circuits for integrating learned and innate valences in the insect brain.. eLife. 10
McElvain LE, Friedman B, Karten HJ, Svoboda K, Wang F, Deschênes M, Kleinfeld D.  2017.  Circuits in the rodent brainstem that control whisking in concert with other orofacial motor actions.. Neuroscience. 368:152-70.
Clayton DA, Vinograd J.  1967.  Circular dimer and catenate forms of mitochondrial DNA in human leukaemic leucocytes.. Nature. 216(5116):652-7.
Tebo AG, Pimenta FM, Zoumpoulaki M, Kikuti C, Sirkia H, Plamont M-A, Houdusse A, Gautier A.  2018.  Circularly Permuted Fluorogenic Proteins for the Design of Modular Biosensors.. ACS Chemical Biology. 13:2392–2397.
Soverna AFaigon, Rodriguez NCabrera, Korgaonkar A, Hasson E, Stern DL, Frankel N.  2020.  Cis-regulatory variation in the shavenbaby gene underlies intraspecific phenotypic variation, mirroring interspecific divergence in the same trait.. Evolution.
Grant T, Rohou A, Grigorieff N.  2018.  cisTEM, User-friendly software for single-particle image processing.. eLife. 7
Garcia-Marques J, Yang C-P, Espinosa Medina I, Koyama M, Lee T.  2019.  CLADES: a programmable sequence of reporters for lineage analysis. bioRxiv.
Hantman AW, Jessell TM.  2010.  Clarke’s column neurons as the focus of a corticospinal corollary circuit.. Nature Neuroscience. 13(10):1233-9.
Sterne GR, Otsuna H, Dickson BJ, Scott K.  2021.  Classification and genetic targeting of cell types in the primary taste and premotor center of the adult brain.. eLife. 10
Li H, Horns F, Wu B, Xie Q, Li J, Li T, Luginbuhl DJ, Quake SR, Luo L.  2017.  Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-Cell RNA Sequencing.. Cell. 171(5):1206-1220.e22.
Stepanyants A, Tamás G, Chklovskii DB.  2004.  Class-specific features of neuronal wiring.. Neuron. 43:251-9.
Heerssen H, Fetter RD, Davis GW.  2008.  Clathrin dependence of synaptic-vesicle formation at the Drosophila neuromuscular junction.. Current Biology. 18(6):401-9.
Smith JB, Lee AK, Jackson J.  2020.  The claustrum.. Current Biology. 30(23):R1401-R1406.
Ohm DT, Bloss EB, Janssen WG, Dietz KC, Wadsworth S, Lou W, Gee NA, Lasley BL, Rapp PR, Morrison JH.  2012.  Clinically relevant hormone treatments fail to induce spinogenesis in prefrontal cortex of aged female rhesus monkeys.. Journal of Neuroscience. 32(34):11700-5.
Giusti C, Pastalkova E, Curto C, Itskov V.  2015.  Clique topology reveals intrinsic geometric structure in neural correlations.. Proceedings of the National Academy of Sciences of the United States of America. 112(44):13455-60.