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Main Menu - Block
Labs:
Project Teams:
- Overview
- Anatomy and Histology
- Cryo-Electron Microscopy
- Electron Microscopy
- Flow Cytometry
- Gene Targeting and Transgenics
- Immortalized Cell Line Culture
- Integrative Imaging
- Invertebrate Shared Resource
- Janelia Experimental Technology
- Mass Spectrometry
- Media Prep
- Molecular Genomics
- Primary & iPS Cell Culture
- Project Pipeline Support
- Project Technical Resources
- Quantitative Genomics
- Scientific Computing Software
- Scientific Computing Systems
- Viral Tools
- Vivarium
2018
Heinrich L, Funke J, Pape C, Nunez-Iglesias J, Saalfeld S.
2018. Synaptic cleft segmentation in non-isotropic volume electron microscopy of the complete Drosophila brain.. Medical Image Computing and Computer Assisted Intervention – MICCAI 2018. :317-25.
Buhmann J, Krause R, Lentini RCeballos, Eckstein N, Cook M, Turaga SC, Funke J.
2018. Synaptic partner prediction from point annotations in insect brains.. MICCAI 2018: Medical Image Computing and Computer Assisted Intervention.
2017
Funke J, Zhang C, Pietzsch T, Ballester MAGonzalez, Saalfeld S.
2017. The candidate multi-cut for cell segmentation.. 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018).
Funke J, Klein J, Moreno-Noguer F, Cardona A, Cook M.
2017. TED: A Tolerant Edit Distance for segmentation evaluation.. Methods. 115:119-27.
2016
Tschopp F, Martel JNP, Turaga SC, Cook M, Funke J.
2016. Efficient convolutional neural networks for pixelwise classification on heterogeneous hardware systems.. IEEE 13th International Symposium on Biomedical Imaging: From Nano to Macro.
Funke J, Klein J, Moreno-Noguer F, Cardona A, Cook M.
2016. Structured learning of assignment models for neuron reconstruction to minimize topological errors.. IEEE 13th International Symposium on Biomedical Imaging (ISBI). :607-11.
2015
Kreshuk A, Funke J, Cardona A, Hamprecht FA.
2015. Who is talking to whom: Synaptic partner detection in anisotropic volumes of insect brain.. Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015. :661-8.
2012
Funke J, Andres B, Hamprecht F, Cardona A, Cook M.
2012. Efficient automatic 3D-reconstruction of branching neurons from EM data.. Computer Vision and Pattern Recognition (CVPR), 2012 IEEE Conference on.