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Labs:
Project Teams:
- Overview
- Anatomy and Histology
- Cryo-Electron Microscopy
- Electron Microscopy
- Flow Cytometry
- Gene Targeting and Transgenics
- Immortalized Cell Line Culture
- Integrative Imaging
- Invertebrate Shared Resource
- Janelia Experimental Technology
- Mass Spectrometry
- Media Prep
- Molecular Genomics
- Primary & iPS Cell Culture
- Project Pipeline Support
- Project Technical Resources
- Quantitative Genomics
- Scientific Computing Software
- Scientific Computing Systems
- Viral Tools
- Vivarium
Journal Article
Ji N, Milkie DE, Betzig E.
2011. Pupil-segmentation-based adaptive optics for microscopy.. Proceedings of SPIE. 7931:79310I.
Meng Z, Lou Z, Liu Z, Hui D, Bartlam M, Rao Z.
2006. Purification, characterization, and crystallization of human pyrroline-5-carboxylate reductase.. Protein Expression and Purification. 49(1):83-7.
Meng Z, Liu Z, Lou Z, Gong X, Cao Y, Bartlam M, Zhang K, Rao Z.
2009. Purification, characterization and crystallization of pyrroline-5-carboxylate reductase from the hyperthermophilic archeon Sulfolobus Solfataricus.. Protein Expression and Purification. 64:125-30.
Wu H, Sun L, Brouns SJJ, Fu S, Akerboom J, Li X, van der Oost J.
2007. Purification, crystallization and preliminary crystallographic analysis of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus.. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 63:239-41.
Akerboom J, Turnbull AP, Hargreaves D, Fisher M, de Geus D, Sedelnikova SE, Berrisford JM, Baker PJ, Verhees CH, van der Oost J et al..
2003. Purification, crystallization and preliminary crystallographic analysis of phosphoglucose isomerase from the hyperthermophilic archaeon Pyrococcus furiosus.. Acta Crystallographica. Section D, Biological Crystallography. 59:1822-3.
Clayton DA, Shadel GS.
2014. Purification of mitochondria by sucrose step density gradient centrifugation.. Cold Spring Harbor Protocols. 2014(10):pdb.prot080028.
Leemann S, Babalian A, Girard F, Davis F, Celio MR.
2022. The PV2 cluster of parvalbumin neurons in the murine periaqueductal gray: connections and gene expression.. Brain Structure and Function. 227(6):2049-72.
Akam T, Lustig A, Rowland J, Kapanaiah SKT, Esteve-Agraz J, Panniello M, Marquez C, Kohl M, Kätzel D, Costa RM et al..
2021. pyControl: Open source, Python based, hardware and software for controlling behavioural neuroscience experiments. bioRxiv.
Zhang H, Liu C, Yu Y, Dai J, Zhao T, Zheng N.
2021. PyNeval: A Python Toolbox for Evaluating Neuron Reconstruction Performance.. Frontiers in Neuroinformatics. 15:767936.
Spruston N.
2008. Pyramidal neurons: dendritic structure and synaptic integration.. Nature Reviews Neuroscience. 9(3):206-21.
Sofroniew NJames.
2017. Q&A: The brain under a mesoscope: the forest and the trees.. BMC Biology. 15(1):82.
Scheede S, Herpens A, Burmeister F, Oltrogge B, Saenger K, Schmidt-Rose T, Schreiner V, Wenck H, Knieps T, Berlage T.
2011. Qualification of a new and precise automatic tool for the assessment of hair diameters in phototrichograms.. Skin Research & Technology. 17(2):186-95.
Stasevich TJ, Sato Y, Nozaki N, Kimura H.
2014. Quantifying histone and RNA polymerase II post-translational modification dynamics in mother and daughter cells.. Methods. 70(2-3):77-88.
Colin-York H, Heddleston J, Wait E, Karedla N, DeSantis M, Khuon S, Chew T-L, Sbalzarini IF, Fritzsche M.
2022. Quantifying Molecular Dynamics within Complex Cellular Morphologies using LLSM-FRAP.. Small Methods. :e2200149.
Sengupta P, Jovanovic-Talisman T, Lippincott-Schwartz J.
2013. Quantifying spatial organization in point-localization superresolution images using pair correlation analysis.. Nature protocols. 8(2):345-54.
Presman DM, Ball DA, Paakinaho V, Grimm JB, Lavis LD, Karpova TS, Hager GL.
2017. Quantifying transcription factor binding dynamics at the single-molecule level in live cells.. Methods (San Diego, Calif.).
Sengupta P, Lippincott-Schwartz J.
2012. Quantitative analysis of photoactivated localization microscopy (PALM) datasets using pair-correlation analysis.. BioEssays : news and reviews in molecular, cellular and developmental biology. 34(5):396-405.
Shekhar S, Zhu L, Mazutis L, Sgro AE, Fai TG, Podolski M.
2014. Quantitative biology: where modern biology meets physical sciences.. Mol Biol Cell. 25(22):3482-5.
Lippincott-Schwartz J.
2014. Quantitative cell biology: transforming the conceptual, theoretical, instrumental, and methodological approaches to cell biology.. Molecular biology of the cell. 25(22):3437.
Ruskin RS, Yu Z, Grigorieff N.
2013. Quantitative characterization of electron detectors for transmission electron microscopy.. Journal of Structural Biology. 184(3):385-93.
Tomer R, Khairy K, Amat F, Keller PJ.
2012. Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy.. Nature Methods. 9(7):755-63.
Keller PJ, Stelzer EHK.
2008. Quantitative in vivo imaging of entire embryos with digital scanned laser light sheet fluorescence microscopy.. Current Opinion in Neurobiology. 18(6):624-32.
Díaz-García CManlio, Lahmann C, Martínez-François JRamón, Li B, Koveal D, Nathwani N, Rahman M, Keller JP, Marvin JS, Looger LL et al..
2019. Quantitative in vivo imaging of neuronal glucose concentrations with a genetically encoded fluorescence lifetime sensor.. Journal of Neuroscience Research. 97(8):946-60.
Long X, Colonell J, Wong AM, Singer RH, Lionnet T.
2017. Quantitative mRNA imaging throughout the entire Drosophila brain.. Nature Methods. 14(7):703-6.
Schneider-Mizell CM, Gerhard S, Longair M, Kazimiers T, Li F, Zwart M, Champion A, Midgley F, Fetter RD, Saalfeld S et al..
2016. Quantitative neuroanatomy for connectomics in Drosophila.. eLife. :e12059.