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Author Title [ Type(Desc)] Year
Journal Article
Reiche MAnton, Jacobs CAdrienne, Aaron JScott, Mizrahi V, Warner DFrancis, Chew T-L.  2023.  A comprehensive strategy to strengthen bioimaging in Africa through the Africa Microscopy Initiative.. Nature Cell Biology. 25(10):1387-1393.
Shigenobu S, Bickel RD, Brisson JA, Butts T, Chang C-C, Christiaens O, Davis GK, Duncan EJ, Ferrier DEK, Iga M et al..  2010.  Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes.. Insect Molecular Biology. 19 Suppl 2:47-62.
Li C, Li X, Bi Z, Sugino K, Wang G, Zhu T, Liu Z.  2020.  Comprehensive transcriptome analysis of cochlear spiral ganglion neurons at multiple ages.. eLife. 9
Lin C-Y, Chuang C-C, Hua T-E, Chen C-C, Dickson BJ, Greenspan RJ, Chiang A-S.  2013.  A comprehensive wiring diagram of the protocerebral bridge for visual information processing in the Drosophila brain.. Cell Reports. 3(5):1739-53.
Gruntman E, Romani S, Reiser MB.  2019.  The computation of directional selectivity in the OFF motion pathway.. eLife. 8
Egnor SERoian, Branson K.  2016.  Computational Analysis of Behavior.. Annual Review of Neuroscience. 39:217-36.
Eddy SR.  2014.  Computational analysis of conserved RNA secondary structure in transcriptomes and genomes.. Annual Review of Biophysics and Biomolecular Structure. 43:433-56.
King NP, Sheffler W, Sawaya MR, Vollmar BS, Sumida JP, André I, Gonen T, Yeates TO, Baker D.  2012.  Computational design of self-assembling protein nanomaterials with atomic level accuracy.. Science. 336(6085):1171-4.
Nawrocki EP, Eddy SR.  2013.  Computational identification of functional RNA homologs in metagenomic data.. RNA Biology. 10:1170-9.
Elia N, Fabrikant G, Kozlov MM, Lippincott-Schwartz J.  2012.  Computational model of cytokinetic abscission driven by ESCRT-III polymerization and remodeling.. Biophysical journal. 102(10):2309-20.
Strother JA.  2013.  A computational model of flow between the microscale respiratory structures of fish gills.. Journal of Theoretical Biology. 338:23-40.
Datta SRobert, Anderson DJ, Branson K, Perona P, Leifer A.  2019.  Computational neuroethology: A call to action.. Neuron. 104(1):11-24.
Stringer C, Pachitariu M.  2018.  Computational processing of neural recordings from calcium imaging data.. Current Opinion in Neurobiology. 55:22-31.
Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY.  2011.  A computational statistics approach for estimating the spatial range of morphogen gradients.. Development. 138(22):4867-74.
Marvin JS, Zhu Z.  2005.  Computation-based engineering of protein and antibody therapeutics.. Drug Design Reviews Online. 2:419-25.
Giurfa M, Zhang S, Jenett A, Menzel R, Srinivasan MV.  2001.  The concepts of ’sameness’ and ’difference’ in an insect.. Nature. 410(6831):930-3.
Jarsky T, Roxin A, Kath WL, Spruston N.  2005.  Conditional dendritic spike propagation following distal synaptic activation of hippocampal CA1 pyramidal neurons.. Nat Neurosci. 8(12):1667-76.
Abdulkadir SA, Magee JA, Peters TJ, Kaleem Z, Naughton CK, Humphrey PA, Milbrandt J.  2002.  Conditional loss of Nkx3.1 in adult mice induces prostatic intraepithelial neoplasia.. Molecular and Cellular Biology. 22(5):1495-503.
Haustein MD, Kracun S, Lu X-H, Shih T, Jackson-Weaver O, Tong X, Xu J, X Yang W, O’Dell TJ, Marvin JS et al..  2014.  Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway.. Neuron. 82(2):413-29.
Wei Z, Wang X-J.  2015.  Confidence estimation as a stochastic process in a neurodynamical system of decision making.. Journal of Neurophysiology. 114(1):99-113.
Molineros JE, Yang W, Zhou X-J, Sun C, Okada Y, Zhang H, Chua KHeng, Lau Y-L, Kochi Y, Suzuki A et al..  2017.  Confirmation of five novel susceptibility loci for systemic lupus erythematosus (SLE) and integrated network analysis of 82 SLE susceptibility loci.. Human Molecular Genetics. 26(6):1205-1216.
Bishop C, Matelsky J, Wilt M, Downs J, Rivlin P, Plaza S, Wester B, Gray-Roncal W.  2021.  CONFIRMS: A Toolkit for Scalable, Black Box Connectome Assessment and Investigation.. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2021:2444-2450.
Liu Y, Pan J, Cai Y, Grigorieff N, Harrison SC, Chen B.  2017.  Conformational states of a soluble, uncleaved HIV-1 envelope trimer.. Journal of Virology. 91(10):e00175-17.
Zheng H, Olia AS, Gonen M, Andrews S, Cingolani G, Gonen T.  2008.  A conformational switch in bacteriophage p22 portal protein primes genome injection.. Molecular Cell. 29(3):376-83.
Park J, Polidoro P, Fortunato C, Arnold J, Mensh B, Gallego JA, Dudman JT.  2023.  Conjoint specification of action by neocortex and striatum.. bioRxiv.