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A
Akselrod-Ballin A, Bock D, R Reid C, Warfield SK.  2009.  Accelerating feature based registration using the Johnson-Lindenstrauss Lemma.. Medical Image Computing and Computer-Assisted Intervention: MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 12:632-9.
Albin SD, Kaun KR, Knapp J-M, Chung P, Heberlein U, Simpson JH.  2015.  A subset of serotonergic neurons evokes hunger in adult Drosophila.. Current Biology : CB. 25(18):2435-40.
Alewijnse B, Ashton AW, Chambers MG, Chen S, Cheng A, Ebrahim M, Eng ET, Hagen WJH, Koster AJ, Lopez CS et al..  2017.  Best practices for managing large CryoEM facilities.. Journal of Structural Biology. 199(3):225-36.
Alfaro E, Sosa LDel Valle, Sanoguet Z, Pastrana-Ríos B, Schreiter ER.  2008.  Crystallization and preliminary X-ray characterization of full-length Chlamydomonas reinhardtii centrin.. Acta Crystallographica Section F Structural Biology and Crystallization Communications. 64(Pt 5):402-4.
Alhadeff AL, Su Z, Hernandez E, Klima ML, Phillips SZ, Holland RA, Guo C, Hantman AW, De Jonghe BC, J Betley N.  2018.  A Neural Circuit for the Suppression of Pain by a Competing Need State.. Cell. 173(1):140-52.
Alicea I, Marvin JS, Miklos AE, Ellington AD, Looger LL, Schreiter ER.  2011.  Structure of the escherichia coli phosphonate binding protein PhnD and rationally optimized phosphonate biosensors.. Journal of Molecular Biology. 414(3):356-69.
A Alivisatos P, Andrews AM, Boyden ES, Chun M, Church GM, Deisseroth K, Donoghue JP, Fraser SE, Lippincott-Schwartz J, Looger LL et al..  2013.  Nanotools for neuroscience and brain activity mapping.. ACS Nano. 7(3):1850-66.
A Alivisatos P, Andrews AM, Boyden ES, Chun M, Church GM, Deisseroth K, Donoghue JP, Fraser SE, Lippincott-Schwartz J, Looger LL et al..  2013.  Nanotools for neuroscience and brain activity mapping.. ACS nano. 7(3):1850-66.
Allen PB, Sgro AE, Chao DL, Doepker BE, J Edgar S, Shen K, Chiu DT.  2008.  Single-synapse ablation and long-term imaging in live C. elegans.. J Neurosci Methods. 173(1):20-6.
Allen WE, Chen MZ, Pichamoorthy N, Tien RH, Pachitariu M, Luo L, Deisseroth K.  2019.  Thirst regulates motivated behavior through modulation of brainwide neural population dynamics.. Science. 364(6437):253.
Allier C, Schneider MC, Innerberger M, Heinrich L, Bogovic JA, Saalfeld S.  2024.  Decomposing heterogeneous dynamical systems with graph neural networks. arXiv.
Allison R, Edgar JR, Pearson G, Rizo T, Newton T, Günther S, Berner F, Hague J, Connell JW, Winkler J et al..  2017.  Defects in ER-endosome contacts impact lysosome function in hereditary spastic paraplegia.. The Journal of Cell Biology. 216(5):1337-55.
Almahayni K, Spiekermann M, Fiore A, Yu G, Pedram K, Möckl L.  2022.  Small molecule inhibitors of mammalian glycosylation.. Matrix Biology Plus. 16:100108.
Almeida JA, Avila DB, Longmore GD, Pathak A.  2025.  History of hypoxia exposure aids future cell invasion according to cell type and collagen density.. Mol Biol Cell. :mbcE24120580.
Almeida-Carvalho MJ, Berh D, Braun A, Chen Y-chun, Eichler K, Eschbach C, Fritsch PMJ, Gerber B, Hoyer N, Jiang X et al..  2017.  The Ol1mpiad: concordance of behavioural faculties of stage 1 and stage 3 Drosophila larvae.. The Journal of Experimental Biology. 220(Pt 13):2452-2475.
Alshaabi T, Milkie D, Liu G, Shirazinejad C, Hong J, Achour K, Görlitz F, Milunovic-Jevtic A, Simmons C, Abuzahriyeh I et al..  2025.  Fourier-Based 3D Multistage Transformer for Aberration Correction in Multicellular Specimens. Research Square.
Altschul SF, Gish W, Miller W., Myers EW, Lipman DJ.  1990.  Basic local alignment search tool.. Journal of Molecular Biology. 215(3):403-10.
Alushin GM, Ramey VH, Pasqualato S, Ball DA, Grigorieff N, Musacchio A, Nogales E.  2010.  The Ndc80 kinetochore complex forms oligomeric arrays along microtubules.. Nature. 467(7317):805-10.
Alves D, Arkani-Hamed N, Arora S, Bai Y, Baumgart M, Berger J, Buckley M, Butler B, Chang S, Cheng H-C et al..  2012.  Simplified models for LHC new physics searches. Journal of Physics G: Nuclear and Particle Physics. 39(10):105005.
Amadei G, Handford CE, Qiu C, De Jonghe J, Greenfeld H, Tran M, Martin BK, Chen D-Y, Aguilera-Castrejon A, Hanna JH et al..  2022.  Embryo model completes gastrulation to neurulation and organogenesis.. Nature. 610(7930):143-153.
Amaravadi RK, Lippincott-Schwartz J, Yin X-M, Weiss WA, Takebe N, Timmer W, DiPaola RS, Lotze MT, White E.  2011.  Principles and current strategies for targeting autophagy for cancer treatment.. Clinical cancer research : an official journal of the American Association for Cancer Research. 17(4):654-66.
Amat F, Castaño-Diez D, Lawrence A, Moussavi F, Winkler H, Horowitz M.  2010.  Alignment of cryo-electron tomography datasets.. Methods in Enzymology. 482:343-67.
Amat F, Lemon W, Mossing DP, McDole K, Wan Y, Branson K, Myers EW, Keller PJ.  2014.  Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data.. Nature Methods. 11(9):951-8.
Amat F, Keller PJ.  2013.  3D Haar-like elliptical features for object classification in microscopy.. International Symposium on Biomedical Imaging.
Amat F, Höckendorf B, Wan Y, Lemon WC, McDole K, Keller PJ.  2015.  Efficient processing and analysis of large-scale light-sheet microscopy data.. Nature Protocols. 10(11):1679-96.