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Lim J, Menon V, Bitzer M, Miller LM, Madrid-Aliste C, Weiss LM, Fiser A, Angeletti RH.  2011.  Frozen tissue can provide reproducible proteomic results of subcellular fractionation.. Analytical biochemistry. 418(1):78-84.
Manley HR, Potter DL, Heddleston JM, Chew T-L, M Keightley C, Lieschke GJ.  2020.  Frontline science: dynamic cellular and subcellular features of migrating leukocytes revealed by in vivo lattice lightsheet microscopy.. Journal of Leukocyte Biology.
Naumann EA, Fitzgerald JE, Dunn TW, Rihel J, Sompolinsky H, Engert F.  2016.  From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.. Cell. 167(4):947-960.e20.
Pitsawong W, Pádua RAP, Grant T, Hoemberger M, Otten R, Bradshaw N, Grigorieff N, Kern D.  2023.  From primordial clocks to circadian oscillators. Nature.
Sgro AE, Schwab DJ, Noorbakhsh J, Mestler T, Mehta P, Gregor T.  2015.  From intracellular signaling to population oscillations: bridging size- and time-scales in collective behavior.. Mol Syst Biol. 11(1):779.
Martynowycz MW, Gonen T.  2018.  From electron crystallography of 2D crystals to MicroED of 3D crystals.. Current Opinion in Colloid & Interface Science . 34:9-16.
Wei Z, Wang X-J, Wang D-H.  2012.  From distributed resources to limited slots in multiple-item working memory: a spiking network model with normalization.. Journal of Neuroscience. 32(33):11228-40.
Peron S, Svoboda K.  2011.  From cudgel to scalpel: toward precise neural control with optogenetics.. Nature Methods. 8(1):30-4.
Rah J-C, Feng L, Druckmann S, Lee H, Kim J.  2015.  From a meso- to micro-scale connectome: array tomography and mGRASP.. Frontiers in Neuroanatomy. 9:78.
Perez-Alvarez A, Fearey BC, Schulze C, O'Toole RJ, Moeyaert B, Mohr MAlexander, Arganda-Carreras I, Yang W, J Wiegert S, Schreiter ER et al..  2020.  Freeze-frame imaging of synaptic activity using SynTagMA.. Nature Communications. 11(1):2464.
Patrick M, Dennis PP, Ehrenberg M, Bremer H.  2015.  Free RNA polymerase in Escherichia coli.. Biochimie. 119:80-91.
Rohou A, Grigorieff N.  2014.  Frealix: Model-based refinement of helical filament structures from electron micrographs.. Journal of Structural Biology. 186(2):234-44.
Grigorieff N.  2016.  Frealign: an exploratory tool for single-particle cryo-EM.. Methods in Enzymology.
Hernández DG, Rivera C, Cande J, Zhou B, Stern D, Berman GJ.  2021.  A framework for studying behavioral evolution by reconstructing ancestral repertoires.. eLife. 10
Parag T, Elgammal A, Mittal A.  2006.  A framework for feature selection for background subtraction.. IEEE Conference on Computer Vision and Pattern Recognition.
Wisedchaisri G, Gonen T.  2011.  Fragment-based phase extension for three-dimensional structure determination of membrane proteins by electron crystallography.. Structure. 19:976-87.
Deb D, Jiao Z, Sims RR, Chen ABo-Yuan, Broxton M, Ahrens M, Podgorski K, Turaga SC.  2022.  FourierNets enable the design of highly non-local optical encoders for computational imaging. Advances in Neural Information Processing Systems.
Sinclair R, Wang M, Jawaid MZaki, Longkumer T, Aaron J, Rossetti B, Wait E, McDonald K, Cox D, Heddleston J et al..  2024.  Four-dimensional quantitative analysis of cell plate development using lattice light sheet microscopy identifies robust transition points between growth phases.. Journal of Experimental Botany.
Sinclair R, Wang M, Jawaid MZaki, Longkumer T, Aaron J, Rossetti B, Wait E, McDonald K, Cox D, Heddleston J et al..  2024.  Four-dimensional quantitative analysis of cell plate development in Arabidopsis using lattice light sheet microscopy identifies robust transition points between growth phases. J Exp Bot. 75(10):2829-2847.
Rivas E.  2013.  The four ingredients of single-sequence RNA secondary structure prediction. A unifying perspective.. RNA Biology. 10(7):1185-96.
Rohwedder A, Wenz NL, Stehle B, Huser A, Yamagata N, Zlatic M, Truman JW, Tanimoto H, Saumweber T, Gerber B et al..  2016.  Four individually identified paired dopamine neurons signal reward in larval Drosophila.. Current Biology : CB.
Murugesan S, Hong J, Yi J, Li D, Beach JR, Shao L, Meinhardt J, Madison G, Wu X, Betzig E et al..  2016.  Formin-generated actomyosin arcs propel T cell receptor microcluster movement at the immune synapse.. The Journal of Cell Biology. 215(3):383-99.
Breda L, Motta I, Lourenco S, Gemmo C, Deng W, Rupon JW, Abdulmalik OY, Manwani D, Blobel GA, Rivella S.  2016.  Forced chromatin looping raises fetal hemoglobin in adult sickle cells to higher levels than pharmacologic inducers.. Blood.
Plaza SM.  2014.  Focused proofreading: efficiently extracting connectomes from segmented EM images.. arXiv. :arXiv:1409.1199[q-bio.QM].
Kumari R, Ven K, Chastney M, Kokate SB, Peränen J, Aaron J, Kogan K, Almeida-Souza L, Kremneva E, Poincloux R et al..  2024.  Focal adhesions contain three specialized actin nanoscale layers. Nature Communications. 15(1)