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Saalfeld S.  2019.  Computational methods for stitching, alignment, and artifact correction of serial section data.. Methods in Cell Biology. 152:261-276.
Nawrocki EP, Eddy SR.  2013.  Computational identification of functional RNA homologs in metagenomic data.. RNA Biology. 10:1170-9.
King NP, Sheffler W, Sawaya MR, Vollmar BS, Sumida JP, André I, Gonen T, Yeates TO, Baker D.  2012.  Computational design of self-assembling protein nanomaterials with atomic level accuracy.. Science. 336(6085):1171-4.
Eddy SR.  2014.  Computational analysis of conserved RNA secondary structure in transcriptomes and genomes.. Annual Review of Biophysics and Biomolecular Structure. 43:433-56.
Egnor SERoian, Branson K.  2016.  Computational Analysis of Behavior.. Annual Review of Neuroscience. 39:217-36.
Gruntman E, Romani S, Reiser MB.  2019.  The computation of directional selectivity in the OFF motion pathway.. eLife. 8
Yeo C, Ahammad P, Ramchandran K, Sastry S.  2006.  Compressed domain real-time action recognition.. IEEE International Workshop on Multimedia Signal Processing.
Lin C-Y, Chuang C-C, Hua T-E, Chen C-C, Dickson BJ, Greenspan RJ, Chiang A-S.  2013.  A comprehensive wiring diagram of the protocerebral bridge for visual information processing in the Drosophila brain.. Cell Reports. 3(5):1739-53.
Li C, Li X, Bi Z, Sugino K, Wang G, Zhu T, Liu Z.  2020.  Comprehensive transcriptome analysis of cochlear spiral ganglion neurons at multiple ages.. eLife. 9
Shigenobu S, Bickel RD, Brisson JA, Butts T, Chang C-C, Christiaens O, Davis GK, Duncan EJ, Ferrier DEK, Iga M et al..  2010.  Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes.. Insect Molecular Biology. 19 Suppl 2:47-62.
Reiche MAnton, Jacobs CAdrienne, Aaron JScott, Mizrahi V, Warner DFrancis, Chew T-L.  2023.  A comprehensive strategy to strengthen bioimaging in Africa through the Africa Microscopy Initiative.. Nature Cell Biology. 25(10):1387-1393.
Zhao A, Nern A, Koskela S, Dreher M, Erginkaya M, Laughland CW, Ludwig HDF, Thomson AG, Hoeller J, Parekh R et al..  2023.  A comprehensive neuroanatomical survey of the Drosophila Lobula Plate Tangential Neurons with predictions for their optic flow sensitivity.. bioRxiv.
Sakaki KDR, Podgorski K, Toth TADellaziz, Coleman P, Haas K.  2020.  Comprehensive imaging of sensory-evoked activity of entire neurons within the awake developing brain using ultrafast AOD-based random-access two-photon microscopy.. Frontiers in Neural Circuits. 14:33.
Peron S, Chen T-W, Svoboda K.  2015.  Comprehensive imaging of cortical networks.. Current Opinion in Neurobiology. 32:115-123.
Takemura S-ya, Nern A, Chklovskii DB, Scheffer LK, Rubin GM, Meinertzhagen IA.  2017.  The comprehensive connectome of a neural substrate for 'ON' motion detection in Drosophila.. eLife. 6
Ben Noon EPreger-, Sabarís G, Ortiz DM, Sager J, Liebowitz A, Stern DL, Frankel N.  2018.  Comprehensive analysis of a cis-regulatory region reveals pleiotropy in enhancer function.. Cell Reports. 22(11):3021-3031.
Marder E, Gutierrez G, Nusbaum MP.  2016.  Complicating connectomes: Electrical coupling creates parallel pathways and degenerate circuit mechanisms.. Developmental Neurobiology.
Marder E, Gutierrez G, Nusbaum MP.  2016.  Complicating connectomes: Electrical coupling creates parallel pathways and degenerate circuit mechanisms.. Developmental Neurobiology.
Courtney KC, Wu L, Mandal T, Swift M, Zhang Z, Alaghemandi M, Wu Z, Bradberry MM, Deo C, Lavis LD et al..  2022.  The complexin C-terminal amphipathic helix stabilizes the fusion pore open state by sculpting membranes.. Nature Structural & Molecular Biology. 29(2):97-107.
Fiolka R, Si K, Cui M.  2012.  Complex wavefront corrections for deep tissue focusing using low coherence backscattered light.. Optics Express. 20(15):16532-43.
Chua NJ, Makarova AA, Gunn P, Villani S, Cohen B, Thasin M, Wu J, Shefter D, Pang S, C Xu S et al..  2023.  A complete reconstruction of the early visual system of an adult insect.. Current Biology. 33(21):4611-4623.
Oldak B, Wildschutz E, Bondarenko V, Comar M-Y, Zhao C, Aguilera-Castrejon A, Tarazi S, Viukov S, Pham TXuan Ai, Ashouokhi S et al..  2023.  Complete human day 14 post-implantation embryo models from naïve ES cells. Nature.
Zheng Z, J Lauritzen S, Perlman E, Robinson CG, Nichols M, Milkie DE, Torrens O, Price J, Fisher CB, Sharifi N et al..  2018.  A complete electron microscopy volume of the brain of adult Drosophila melanogaster.. Cell. 174(3):730-43.
Yu H-H, Kao C-F, He Y, Ding P, Kao J-C, Lee T.  2010.  A complete developmental sequence of a Drosophila neuronal lineage as revealed by twin-spot MARCM.. PLoS Biology. 8
Bates AS, Schlegel P, Roberts RJV, Drummond N, Tamimi IFM, Turnbull R, Zhao X, Marin EC, Popovici PD, Dhawan S et al..  2020.  Complete connectomic reconstruction of olfactory projection neurons in the fly brain.. Current Biology. 30(16):3183-99.