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Qian Y, Piatkevich KD, Larney BMc, Abdelfattah AS, Mehta S, Murdock MH, Gottschalk S, Molina RS, Zhang W, Chen Y et al..  2019.  A genetically encoded near-infrared fluorescent calcium ion indicator.. Nature Methods. 16(2):171-4.
Looger LL, Griesbeck O.  2012.  Genetically encoded neural activity indicators.. Current Opinion in Neurobiology. 22(1):18-23.
Lobas MA, Tao R, Nagai J, Kronschläger MT, Borden PM, Marvin JS, Looger LL, Khakh BS.  2019.  A genetically encoded single-wavelength sensor for imaging cytosolic and cell surface ATP.. Nature Communications. 10(1):711.
Zhang X, Guan W, Yang T, Furlan A, Xiao X, Yu K, An X, Galbavy W, Ramakrishnan C, Deisseroth K et al..  2021.  Genetically identified amygdala-striatal circuits for valence-specific behaviors.. Nature Neuroscience. 24(11):1586-1600.
Atasoy D, J Betley N, Li W-P, Su HH, Sertel SM, Scheffer LK, Simpson JH, Fetter RD, Sternson SM.  2014.  A genetically specified connectomics approach applied to long-range feeding regulatory circuits.. Nature Neuroscience. 17(12):1830-9.
Hu H, Kahrizi K, Musante L, Fattahi Z, Herwig R, Hosseini M, Oppitz C, Abedini SSedigheh, Suckow V, Larti F et al..  2019.  Genetics of intellectual disability in consanguineous families.. Mol Psychiatry. 24(7):1027-1039.
Martinez RA, Stein JL, Krostag A-RF, Nelson AM, Marken JS, Menon V, May RC, Yao Z, Kaykas A, Geschwind DH et al..  2015.  Genome engineering of isogenic human ES cells to model autism disorders.. Nucleic acids research. 43(10):e65.
Kao D, Lai AG, Stamataki E, Rosic S, Konstantinides N, Jarvis E, Di Donfrancesco A, Pouchkina-Stantcheva N, Semon M, Grillo M et al..  2016.  The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion.. eLife. 5:e20062.
Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF et al..  2000.  The genome sequence of Drosophila melanogaster.. Science. 287(5461):2185-95.
[Anonymous].  2010.  Genome sequence of the pea aphid Acyrthosiphon pisum.. PLoS Biology. 8(2):e1000313.
International Glossina Genome Initiative.  2014.  Genome sequence of the tsetse fly (Glossina morsitans): vector of African trypanosomiasis.. Science. 344(6182):380-6.
Dufault-Thompson K, Jian H, Cheng R, Li J, Wang F, Zhang Y.  2017.  A Genome-Scale Model of Simulates Mechanisms of Metabolic Diversity and Energy Conservation.. mSystems. 2(2)
Schumann G, Coin LJ, Lourdusamy A, Charoen P, Berger KH, Stacey D, Desrivières S, Aliev FA, Khan AA, Amin N et al..  2011.  Genome-wide association and genetic functional studies identify autism susceptibility candidate 2 gene (AUTS2) in the regulation of alcohol consumption.. Proceedings of the National Academy of Sciences of the United States of America. 108(17):7119-24.
Kok K, Ay A, Li LM, Arnosti DN.  2015.  Genome-wide errant targeting by Hairy.. eLife. 4
Lacin H, Rusch J, Yeh RT, Fujioka M, Wilson BA, Zhu Y, Robie AA, Mistry H, Wang T, Jaynes JB et al..  2014.  Genome-wide identification of Drosophila Hb9 targets reveals a pivotal role in directing the transcriptome within eight neuronal lineages, including activation of nitric oxide synthase and Fd59a/Fox-D.. Developmental Biology. 388:117-33.
Ochiai H, Hayashi T, Umeda M, Yoshimura M, Harada A, Shimizu Y, Nakano K, Saitoh N, Liu Z, Yamamoto T et al..  2020.  Genome-wide kinetic properties of transcriptional bursting in mouse embryonic stem cells.. Science Advances. 6(25):eaaz6699.
Bilen J, Bonini NM.  2007.  Genome-wide screen for modifiers of ataxin-3 neurodegeneration in Drosophila.. PLoS Genetics. 3(10):1950-64.
Dietzl G, Chen D, Schnorrer F, Su K-C, Barinova Y, Fellner M, Gasser B, Kinsey K, Oppel S, Scheiblauer S et al..  2007.  A genome-wide transgenic RNAi library for conditional gene inactivation in Drosophila.. Nature. 448(7150):151-6.
Hoopfer ED, Penton A, Watts RJ, Luo L.  2008.  Genomic analysis of Drosophila neuronal remodeling: a role for the RNA-binding protein Boule as a negative regulator of axon pruning.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 28(24):6092-103.
Baker B.S., Arbeitman M., Furlong E., Imam F., Johnson E., Null B..  2002.  A genomic analysis of gene expresson during the Drosophila life cycle.. Science. :2270-75.
Singer RH, Deng W, Lionnet T.  2017.  Genomic probes.. USPTO. A1
Kapheim KM, Pan H, Li C, Salzberg SL, Puiu D, Magoc T, Robertson HM, Hudson ME, Venkat A, Fischman BJ et al..  2015.  Genomic signatures of evolutionary transitions from solitary to group living.. Science.
Shepherd GMG, Stepanyants A, Bureau I, Chklovskii D, Svoboda K.  2005.  Geometric and functional organization of cortical circuits.. Nature Neuroscience. 8(6):782-90.
Biswas T, Fitzgerald JE.  2022.  A geometric framework to predict structure from function in neural networks. Physical Review Research. 4(2):023255.
Stepanyants A, Hof PR, Chklovskii DB.  2002.  Geometry and structural plasticity of synaptic connectivity.. Neuron. 34(2):275-88.