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P
Peale DR, Hess H, Lee P.R, Cardona A, Bock DD, Schneider-Mizell C, Fetter RD, Lee W-P, Robinson CG, Iyer N et al..  2024.  iTome Volumetric Serial Sectioning Apparatus for TEM. bioRxiv.
Pecot MY, Tadros W, Nern A, Bader M, Chen Y, S Zipursky L.  2013.  Multiple interactions control synaptic layer specificity in the Drosophila visual system.. Neuron. 77(2):299-310.
Peddie CJ, Genoud C, Kreshuk A, Meechan K, Micheva KD, Narayan K, Pape C, Parton RG, Schieber NL, Schwab Y et al..  2022.  Volume electron microscopy.. Nature Reviews: Methods Primers. 2:51.
Pedrosa AT, Nogueira AT, Thwaites TR, Aaron J, Chew T-L, Carabeo RA.  2018.  The Chlamydia type III effector TarP alters the dynamics and organization of host focal adhesions.. bioRxiv.
Pedrosa AT, Murphy KN, Nogueira AT, Brinkworth AJ, Thwaites TR, Aaron J, Chew T-L, Carabeo RA.  2020.  A post-invasion role for type III effector TarP in modulating the dynamics and organization of host cell focal adhesions.. Journal of Biological Chemistry. 295(43):14763-14779.
Peek MY, Card GM.  2016.  Comparative approaches to escape.. Current Opinion in Neurobiology. 41:167-173.
Pehlevan C, Chklovskii DB.  2014.  A Hebbian/Anti-Hebbian network derived from online non-negative matrix factorization can cluster and discover sparse features.. 2014 48th Asilomar Conference on Signals, Systems and Computers2014 48th Asilomar Conference on Signals, Systems and Computers.
Peluffo AE, Nuez I, Debat V, Savisaar R, Stern DL, Orgogozo V.  2015.  A major locus controls a genital shape difference involved in reproductive isolation between Drosophila yakuba and Drosophila santomea.. G3 (Bethesda, Md.). 5(12):2893-901.
Peng H, Bateman A, Valencia A, Wren JD.  2012.  Bioimage informatics: a new category in Bioinformatics.. Bioinformatics. 28(8):1057.
Peng H, Long F, Zhou J, Leung G, Eisen MB, Myers EW.  2007.  Automatic image analysis for gene expression patterns of fly embryos.. BMC Cell Biology. 8(Supplement 1):S7.
Peng H, Hawrylycz M, Roskams J, Hill S, Spruston N, Meijering E, Ascoli GA.  2015.  BigNeuron: Large-scale 3D neuron reconstruction from optical microscopy images.. Neuron. 87:252-6.
Peng H, Long F, Zhao T, Myers E.  2011.  Proof-editing is the bottleneck of 3D neuron reconstruction: the problem and solutions.. Neuroinformatics. 9:103-5.
Peng H, Long F, Ding C.  2005.  Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy.. IEEE Transactions on Pattern Analysis and Machine Intelligence. 27(8):1226-38.
Peng H, Long F, Myers EW.  2007.  Straightening worm images.. 2007 4TH IEEE International Symposium on Biomedical Imagin : Macro to Nano, VOLS 1-3. :292-5.
Peng H, Ruan Z, Long F, Simpson JH, Myers EW.  2010.  VAA3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets.. Nature Biotechnology. 28:348-53.
Peng H, Long F, Liu X, Kim SK, Myers EW.  2008.  Straightening caenorhabditis elegans images.. Bioinformatics. 24:234-42.
Peng H.  2008.  Bioimage informatics: a new area of engineering biology.. Bioinformatics. 24(17):1827-36.
Peng H, Long F, Myers EW.  2009.  VANO: a volume-object image annotation system.. Bioinformatics. 25:695-7.
Peng H, Ruan Z, Atasoy D, Sternson S.  2010.  Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model.. Bioinformatics. 26:i38-46.
Peng H, Chung P, Long F, Qu L, Jenett A, Seeds AM, Myers EW, Simpson JH.  2011.  BrainAligner: 3D registration atlases of Drosophila brains.. Nature Methods. 8:493-500.
Peng Y, Gillis-Smith S, Jin H, Tränkner D, Ryba NJP, Zuker CS.  2015.  Sweet and bitter taste in the brain of awake behaving animals.. Nature. 527(7579):512-5.
Peng H, Tang J, Xiao H, Bria A, Zhou J, Butler V, Zhou Z, Gonzalez-Bellido PT, Oh SW, Chen J et al..  2014.  Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte volume image visualization and analysis.. Nature Communications. 5:4342.
Peng X, Clements J, Jiang Z, Preibisch S, Li J.  2023.  PEELing: an integrated and user-centric platform for cell-surface proteomics analysis. bioRxiv.
Pentimalli TMassimo, Schallenberg S, León-Periñán D, Legnini I, Theurillat I, Thomas G, Boltengagen A, Fritzsche S, Nimo J, Ruff L et al..  2025.  Combining spatial transcriptomics and ECM imaging in 3D for mapping cellular interactions in the tumor microenvironment.. Cell Syst. :101261.
Pereanu W, Younossi-Hartenstein A, Lovick J, Spindler S, Hartenstein V.  2011.  Lineage-based analysis of the development of the central complex of the Drosophila brain.. J Comp Neurol. 519(4):661-89.