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Author Title [ Type(Desc)] Year
Journal Article
Nannenga BL, Gonen T.  2014.  Protein structure determination by MicroED.. Current Opinion in Structural Biology. 27C:24-31.
Tillberg P.  2021.  Protein-Retention Expansion Microscopy (ExM): Scalable and Convenient Super-Resolution Microscopy.. Methods in Molecular Biology. 2304:147-156.
Tillberg P, Chen F, Piatkevich KD, Zhao Y, Yu C-CJay, English BP, Gao L, Martorell A, Suk H-J, Yoshida F et al..  2016.  Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies.. Nature Biotechnology. 34(9):987-92.
Hart C, Abuladel N, Bee M, Kreider MC, CVitan AC, Esson MM, Farag A, Ibeh T, Kalivas EN, Larco D-M et al..  2017.  Protein-templated gold nanoparticle synthesis: protein organization, controlled gold sequestration, and unexpected reaction products.. Dalton Transactions (Cambridge, England : 2003). 46(47):16465-16473.
Zhou Y, Waanders LF, Holmseth S, Guo C, Berger UV, Li Y, Lehre A-C, Lehre KP, Danbolt NC.  2014.  Proteome analysis and conditional deletion of the EAAT2 glutamate transporter provide evidence against a role of EAAT2 in pancreatic insulin secretion in mice.. The Journal of Biological Chemistry. 289(3):1329-44.
Davis FP.  2011.  Proteome-wide prediction of overlapping small molecule and protein binding sites using structure.. Molecular BioSystems. 7(2):545-57.
McKellar CE, Wyttenbach RA.  2017.  A protocol demonstrating 60 different Drosophila behaviors in one assay.. Journal of Undergraduate Neuroscience Education (JUNE). 15(2):A110-6.
Polilov AA, Makarova AA, Pang S, C Xu S, Hess H.  2021.  Protocol for preparation of heterogeneous biological samples for 3D electron microscopy: a case study for insects.. Scientific Reports. 11(1):4717.
Wisedchaisri G, Park M-S, Iadanza MG, Zheng H, Gonen T.  2014.  Proton-coupled sugar transport in the prototypical major facilitator superfamily protein XylE.. Nature Communication. 5:4521.
Zheng H, Taraska J, Merz AJ, Gonen T.  2010.  The prototypical H+/galactose symporter GalP assembles into functional trimers.. Journal of Molecular Biology. 396(3):593-601.
Han S, Li J, Ting AY.  2018.  Proximity labeling: spatially resolved proteomic mapping for neurobiology.. Curr Opin Neurobiol. 50:17-23.
Hajj B, Beheiry MEl, Dahan M.  2016.  PSF engineering in multifocus microscopy for increased depth volumetric imaging.. Biomedical Optics Express. 7(3):726-31.
Erezyilmaz DF, Riddiford LM, Truman JW.  2006.  The pupal specifier broad directs progressive morphogenesis in a direct-developing insect.. Proceedings of the National Academy of Sciences of the United States of America. 103:6925-30.
Erezyilmaz DF, Stern DL.  2013.  Pupariation site preference within and between Drosophila sibling species.. Evolution. 67(9):2714-27.
Wang C, Ji N.  2012.  Pupil-segmentation-based adaptive optical correction of a high-numerical-aperture gradient refractive index lens for two-photon fluorescence endoscopy.. Optics Letters. 37:2001-3.
Milkie DE, Betzig E, Ji N.  2011.  Pupil-segmentation-based adaptive optical microscopy with full-pupil illumination.. Optics Letters. 36(21):4206-8.
Ji N, Milkie DE, Betzig E.  2011.  Pupil-segmentation-based adaptive optics for microscopy.. Proceedings of SPIE. 7931:79310I.
Meng Z, Lou Z, Liu Z, Hui D, Bartlam M, Rao Z.  2006.  Purification, characterization, and crystallization of human pyrroline-5-carboxylate reductase.. Protein Expression and Purification. 49(1):83-7.
Meng Z, Liu Z, Lou Z, Gong X, Cao Y, Bartlam M, Zhang K, Rao Z.  2009.  Purification, characterization and crystallization of pyrroline-5-carboxylate reductase from the hyperthermophilic archeon Sulfolobus Solfataricus.. Protein Expression and Purification. 64:125-30.
Wu H, Sun L, Brouns SJJ, Fu S, Akerboom J, Li X, van der Oost J.  2007.  Purification, crystallization and preliminary crystallographic analysis of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus.. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 63:239-41.
Akerboom J, Turnbull AP, Hargreaves D, Fisher M, de Geus D, Sedelnikova SE, Berrisford JM, Baker PJ, Verhees CH, van der Oost J et al..  2003.  Purification, crystallization and preliminary crystallographic analysis of phosphoglucose isomerase from the hyperthermophilic archaeon Pyrococcus furiosus.. Acta Crystallographica. Section D, Biological Crystallography. 59:1822-3.
Clayton DA, Shadel GS.  2014.  Purification of mitochondria by sucrose step density gradient centrifugation.. Cold Spring Harbor Protocols. 2014(10):pdb.prot080028.
Leemann S, Babalian A, Girard F, Davis F, Celio MR.  2022.  The PV2 cluster of parvalbumin neurons in the murine periaqueductal gray: connections and gene expression.. Brain Structure and Function. 227(6):2049-72.
Akam T, Lustig A, Rowland J, Kapanaiah SKT, Esteve-Agraz J, Panniello M, Marquez C, Kohl M, Kätzel D, Costa RM et al..  2021.  pyControl: Open source, Python based, hardware and software for controlling behavioural neuroscience experiments. bioRxiv.
Zhang H, Liu C, Yu Y, Dai J, Zhao T, Zheng N.  2021.  PyNeval: A Python Toolbox for Evaluating Neuron Reconstruction Performance.. Frontiers in Neuroinformatics. 15:767936.