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Braun L, Dominé C, Fitzgerald J, Saxe A.  2022.  Exact learning dynamics of deep linear networks with prior knowledge. Neural Information Processing Systems.
Breda L, Motta I, Lourenco S, Gemmo C, Deng W, Rupon JW, Abdulmalik OY, Manwani D, Blobel GA, Rivella S.  2016.  Forced chromatin looping raises fetal hemoglobin in adult sickle cells to higher levels than pharmacologic inducers.. Blood.
Breimann L, Bahry E, Zouinkhi M, Kolyvanov K, Street LAnnika, Preibisch S, Ercan S.  2024.  Analysis of developmental gene expression using smFISH and in silico staging of C. elegans embryos. bioRxiv.
Breimann L, Bahry E, Zouinkhi M, Kolyvanov K, Street LAnnika, Preibisch S, Ercan S.  2024.  Analysis of developmental gene expression using smFISH and in silico staging of C. elegans embryos. bioRxiv.
Brenowitz S, Duguid I, Kammermeier PJ.  2017.  Ion Channels: History, Diversity, and Impact.. Cold Spring Harbor Protocols. 2017(7):pdb.top092288.
Bria A, Iannello G, Peng H.  2015.  An open-source VAA3D plugin for real-time 3D visualization of terabyte-sized volumetric images.. IEEE 12th International Symposium on Biomedical Imaging.
Bridi MS, Schoch H, Florian C, Poplawski SG, Banerjee A, Hawk JD, Banks GS, Lejards C, Hahn C-G, Giese KPeter et al..  2020.  Transcriptional co-repressor Sin3a regulates hippocampal synaptic plasticity via Homer1/mGluR5.. JCI Insight.
Briggman KL, Bock DD.  2012.  Volume electron microscopy for neuronal circuit reconstruction.. Current Opinion in Neurobiology. 22(1):154-61.
Brilot AF, Chen JZ, Cheng A, Pan J, Harrison SC, Potter CS, Carragher B, Henderson R, Grigorieff N.  2012.  Beam-induced motion of vitrified specimen on holey carbon film.. Journal of Structural Biology. 177(3):630-7.
Brisson JA, Nuzhdin SV, Stern DL.  2009.  Similar patterns of linkage disequilibrium and nucleotide diversity in native and introduced populations of the pea aphid, Acyrthosiphon pisum.. BMC Genetics. 10:22.
Brisson JA, Stern DL.  2006.  The pea aphid, Acyrthosiphon pisum: an emerging genomic model system for ecological, developmental and evolutionary studies.. Bioessays. 28(7):747-55.
Brisson JA, Davis GK, Stern DL.  2007.  Common genome-wide patterns of transcript accumulation underlying the wing polyphenism and polymorphism in the pea aphid (Acyrthosiphon pisum).. Evol Dev. 9(4):338-46.
Brody T, Yavatkar AS, Kuzin A, Kundu M, Tyson LJ, Ross J, Lin T-Y, Lee C-H, Awasaki T, Lee T et al..  2012.  Use of a Drosophila genome-wide conserved sequence database to identify functionally related cis-regulatory enhancers.. Developmental Dynamics: An Official Publication of the American Association of Anatomists. 241:169-89.
Broome BM, Jayaraman V, Laurent G.  2005.  Encoding and decoding of overlapping odor sequences.. Neuron. 51(4):467-82.
Brouns SJJ, Barends TRM, Worm P, Akerboom J, Turnbull AP, Salmon L, van der Oost J.  2008.  Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.. Journal of Molecular Biology. 379:357-71.
Brouns SJJ, Wu H, Akerboom J, Turnbull AP, de Vos WM, van der Oost J.  2005.  Engineering a selectable marker for hyperthermophiles.. The Journal of Biological Chemistry. 280(12):11422-31.
Brouns SJJ, Turnbull AP, Willemen HLDM, Akerboom J, van der Oost J.  2007.  Crystal structure and biochemical properties of the D-arabinose dehydrogenase from Sulfolobus solfataricus.. Journal of Molecular Biology. 371(5):1249-60.
Broussard GJoey, Liang Y, Fridman M, Unger EK, Meng G, Xiao X, Ji N, Petreanu L, Tian L.  2018.  In vivo measurement of afferent activity with axon-specific calcium imaging.. Nature Neuroscience.
Brown TA, Tkachuk AN, Shtengel G, Kopek BG, Bogenhagen DF, Hess HF, Clayton DA.  2011.  Superresolution fluorescence imaging of mitochondrial nucleoids reveals their spatial range, limits, and membrane interaction.. Molecular and Cellular Biology. 31:4994-5010.
Brown TA, Fetter RD, Tkachuk AN, Clayton DA.  2010.  Approaches toward super-resolution fluorescence imaging of mitochondrial proteins using PALM.. Methods. 51(4):458-63.
Brown TA, Cecconi C, Tkachuk AN, Bustamante C, Clayton DA.  2005.  Replication of mitochondrial DNA occurs by strand displacement with alternative light-strand origins, not via a strand-coupled mechanism.. Genes & Development. 19(20):2466-76.
Brown TA, Trumpower BL.  1995.  Strain-dependent variation in carbon source regulation of nucleus-encoded mitochondrial proteins of Saccharomyces cerevisiae.. Journal of Bacteriology. 177(5):1380-2.
Brown HLD, Truman JW.  2009.  Fine-tuning of secondary arbor development: the effects of the ecdysone receptor on the adult neuronal lineages of the Drosophila thoracic CNS.. Development. 136(19):3247-56.
Brown TA, Clayton DA.  2002.  Release of replication termination controls mitochondrial DNA copy number after depletion with 2’,3’-dideoxycytidine.. Nucleic Acids Research. 30(9):2004-10.
Brown TA, Tkachuk AN, Clayton DA.  2015.  Mitochondrial transcription factor A (TFAM) binds to RNA containing 4-way junctions and mitochondrial tRNA.. PloS one. 10(11):e0142436.