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Brouns SJJ, Wu H, Akerboom J, Turnbull AP, de Vos WM, van der Oost J.  2005.  Engineering a selectable marker for hyperthermophiles.. The Journal of Biological Chemistry. 280(12):11422-31.
Yeung YAndy, Leabman MK, Marvin JS, Qiu J, Adams CW, Lien S, Starovasnik MA, Lowman HB.  2009.  Engineering human IgG1 affinity to human neonatal Fc receptor: impact of affinity improvement on pharmacokinetics in primates.. Journal of Immunology. 182(12):7663-71.
Benaissa H, Ounoughi K, Aujard I, Fischer E, Goïame R, Nguyen J, Tebo AG, Li C, Le Saux T, Bertolin G et al..  2021.  Engineering of a fluorescent chemogenetic reporter with tunable color for advanced live-cell imaging.. Nature Communications. 12(1):6989.
Hayer A, Shao L, Chung M, Joubert L-M, Yang HWon, Tsai F-C, Bisaria A, Betzig E, Meyer T.  2016.  Engulfed cadherin fingers are polarized junctional structures between collectively migrating endothelial cells.. Nature Cell Biology. 18(12):1311-23.
C Xu S, Hayworth KJ, Lu Z, Grob P, Hassan AM, García-Cerdán JG, Niyogi KK, Nogales E, Weinberg RJ, Hess HF.  2017.  Enhanced FIB-SEM systems for large-volume 3D imaging.. eLife. 6
Chen H-M, Huang Y, Pfeiffer BD, Yao X, Lee T.  2015.  An enhanced gene targeting toolkit for Drosophila: golic+.. Genetics. 199(3):683-94.
Chen H-M, Yao X, Ren Q, Chang C-C, Liu L-Y, Miyares RLinda, Lee T.  2020.  Enhanced Golic+: Highly effective CRISPR gene targeting and transgene HACKing in .. Development.
Tebo A, Quaranta A, Pecoraro VL, Aukauloo A.  2021.  Enhanced Photoinduced Electron Transfer Through a Tyrosine Relay in a De Novo Designed Protein Scaffold Bearing a Photoredox Unit and a Fe II S 4 Site. ChemPhotoChem. 5(7):665-668.
Leonardo A, Fee MS.  2005.  Ensemble coding of vocal control in birdsong.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 25(3):652-61.
Loveland AB, Demo G, Grigorieff N, Korostelev AA.  2017.  Ensemble cryo-EM elucidates the mechanism of translation fidelity.. Nature. 546(7656):113-117.
Abeyrathne PD, San Koh C, Grant T, Grigorieff N, Korostelev AA.  2016.  Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome.. eLife. 5
Charlton JA, Młynarski WF, Bai YH, Hermundstad AM, Goris RLT.  2023.  Environmental dynamics shape perceptual decision bias.. PLoS Computational Biology. 19(6):e1011104.
D. Shon J, Malaker SA, Pedram K, Yang E, Krishnan V, Dorigo O, Bertozzi CR.  2020.  An enzymatic toolkit for selective proteolysis, detection, and visualization of mucin-domain glycoproteins. Proceedings of the National Academy of Sciences. 117(35):21299-21307.
Kim C-S, Pierre B, Ostermeier M, Looger LL, Kim JRyoun.  2009.  Enzyme stabilization by domain insertion into a thermophilic protein.. Protein Engineering, Design & Selection : PEDS. 22(10):615-23.
Suter BA, O'Connor T, Iyer V, Petreanu LT, Hooks BM, Kiritani T, Svoboda K, Shepherd GMG.  2010.  Ephus: multipurpose data acquisition software for neuroscience experiments.. Front Neural Circuits. 4:100.
Sendra M, McDole K, Jimenez-Carretero D, Hourcade Jde Dios, Temiño S, Guignard L, Keller PJ, Sánchez-Cabo F, Domínguez JN, Torres M.  2024.  Epigenetic priming of embryonic lineages in the mammalian epiblast. bioRxiv.
Franzelin A, Lamothe-Molina PJ, Gee CE, Formozov A, Schreiter ER, Morellini F, Oertner TGlenn.  2024.  Epigenetic repression of cFos supports sequential formation of distinct spatial memories.. bioRxiv.
Mo A, Luo C, Davis FP, Mukamel EA, Henry GL, Nery JR, Urich MA, Picard S, Lister R, Eddy SR et al..  2016.  Epigenomic landscapes of retinal rods and cones.. eLife. 5
Mo A, Mukamel EA, Davis FP, Luo C, Henry GL, Picard S, Urich MA, Nery JR, Sejnowski TJ, Lister R et al..  2015.  Epigenomic signatures of neuronal diversity in the mammalian brain.. Neuron. 86(6):1369-1384.
King C, Sengupta P, Seo AY, Lippincott-Schwartz J.  2020.  ER membranes exhibit phase behavior at sites of organelle contact.. Proceedings of the National Academy of Sciences of the United States of America. 117(13):7225-7235.
Zheng P, Obara CJ, Szczesna E, Nixon-Abell J, Mahalingan KK, Roll-Mecak A, Lippincott-Schwartz J, Blackstone C.  2022.  ER proteins decipher the tubulin code to regulate organelle distribution.. Nature. 601(7891):132-138.
Satpute-Krishnan P, Ajinkya M, Bhat S, Itakura E, Hegde RS, Lippincott-Schwartz J.  2014.  ER stress-induced clearance of misfolded GPI-anchored proteins via the secretory pathway.. Cell. 158(3):522-33.
Sha F, Abdelfattah AS, Patel R, Schreiter ER.  2020.  Erasable labeling of neuronal activity using a reversible calcium marker.. eLife. 9
Samolis PD, Langley D, O'Reilly BM, Oo Z, Hilzenrat G, Erramilli S, Sgro AE, McArthur S, Sander MY.  2021.  Erratum: Label-free imaging of fibroblast membrane interfaces and protein signatures with vibrational infrared photothermal and phase signals: publisher's note.. Biomed Opt Express. 12(9):5400.
Giladi E, Healy J, Myers G, Hart C, Kapranov P, Lipson D, Roels S, Thayer E, Letovsky S.  2010.  Error tolerant indexing and alignment of short reads with covering template families.. Journal of Computational Biology: A Journal of Computational Molecular Cell Biology. 17(10):1397-1411.