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Author [ Title(Desc)] Type Year
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A
Buhmann J, Sheridan A, Gerhard S, Krause R, Nguyen T, Heinrich L, Schlegel P, Lee W-CAllen, Wilson R, Saalfeld S et al..  2021.  Automatic Detection of Synaptic Partners in a Whole-Brain Drosophila EM Dataset. Nature Methods. 18(7):771-4.
Grant T, Grigorieff N.  2015.  Automatic estimation and correction of anisotropic magnification distortion in electron microscopes.. Journal of Structural Biology. 192(2):204-8.
Kainmueller D, Hege H-C, Seim H, Heller M, Zachow S.  2009.  Automatic Extraction of Anatomical Landmarks From Medical Image Data: An Evaluation of Different Methods.
Kainmueller D, Lamecker H, Seim H, Zinser M, Zachow S.  2009.  Automatic extraction of mandibular nerve and bone from cone-beam CT data.. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 12(Pt 2):76-83.
Peng H, Long F, Zhou J, Leung G, Eisen MB, Myers EW.  2007.  Automatic image analysis for gene expression patterns of fly embryos.. BMC Cell Biology. 8(Supplement 1):S7.
Saalfeld S, Tomancak P.  2008.  Automatic landmark correspondence detection for ImageJ.. Proceedings of the ImageJ User and Developer Conference.
Xie J, Zhao T, Lee T, Myers E, Peng H.  2010.  Automatic neuron tracing in volumetric microscopy images with anisotropic path searching.. Medical Image Computing and Computer-Assisted Intervention: MICCAI International Conference on Medical Image Computing and Computer-Assisted Intervention. 13:472-9.
Plaza SM, Zhao T.  2014.  Automatic neuron type identification by neurite localization in the Drosophila medulla.. arXiv. :arXiv:1409.1892[q-bio.NC].
Zhou J, Peng H.  2007.  Automatic recognition and annotation of gene expression patterns of fly embryos.. Bioinformatics. 23(5):589-96.
Long F, Peng H, Liu X, Kim SK, Myers E.  2008.  Automatic recognition of cells (ARC) for 3D images of C. elegans.. Proceedings of the 2008 Conference on Computational Molecular Biology (RECOMB) (Singapore, 2008).
Peng H, Ruan Z, Atasoy D, Sternson S.  2010.  Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model.. Bioinformatics. 26:i38-46.
Long F, Peng H, Myers E.  2007.  Automatic segmentation of nuclei in 3D microscopy images of C. elegans.. 2007 4TH IEEE International Symposium on Biomedical Imaging: Macro to Nano, VOLS 1-3. :536-9.
Kainmueller D, Seim H, Heller M, Lamecker H, Zachow S, Hege H-C.  2008.  Automatic Segmentation of the Pelvic Bones from CT Data Based on a Statistical Shape Model.
Xie J, Khan S, Shah M.  2008.  Automatic tracking of Escherichia coli bacteria.. Medical Image Computing and Computer-Assisted Intervention: MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 11:824-32.
Xie J, Khan S, Shah M.  2009.  Automatic tracking of Escherichia coli in phase-contrast microscopy video.. IEEE Transactions on Bio-Medical Engineering. 56(2):390-9.
Mishchenko Y.  2009.  Automation of 3D reconstruction of neural tissue from large volume of conventional serial section transmission electron micrographs.. Journal of Neuroscience Methods. 176(2):276-89.
Santos ÁDos, Rollins DE, Hari-Gupta Y, McArthur H, Du M, Ru SYong Zi, Pidlisna K, Stranger A, Lorgat F, Lambert D et al..  2023.  Autophagy receptor NDP52 alters DNA conformation to modulate RNA polymerase II transcription.. Nature Communications. 14(1):2855.
Gao L, Li G, R Cooks G.  2010.  Axial CID and high pressure resonance CID in a miniature ion trap mass spectrometer using a discontinuous atmospheric pressure interface.. Journal of the American Society for Mass Spectrometry. 21(2):209-14.
Watts RJ, Hoopfer ED, Luo L.  2003.  Axon pruning during Drosophila metamorphosis: evidence for local degeneration and requirement of the ubiquitin-proteasome system.. Neuron. 38(6):871-85.
de Juan-Sanz J, Holt GT, Schreiter ER, de Juan F, Kim DS, Ryan TA.  2017.  Axonal Endoplasmic Reticulum Ca(2+) Content Controls Release Probability in CNS Nerve Terminals.. Neuron. 93(4):867-81.
Apostolides PF, Milstein AD, Grienberger C, Bittner KC, Magee JC.  2016.  Axonal filtering allows reliable output during dendritic plateau-driven complex spiking in CA1 neurons.. Neuron. 89(4):770-783.
Talantova M, Sanz-Blasco S, Zhang X, Xia P, Akhtar MWaseem, Okamoto S-ichi, Dziewczapolski G, Nakamura T, Cao G, Pratt AE et al..  2013.  Aβ induces astrocytic glutamate release, extrasynaptic NMDA receptor activation, and synaptic loss.. Proceedings of the National Academy of Sciences of the United States of America. 110(27):E2518-27.
B
Wu B, Chen J, Singer RH.  2014.  Background free imaging of single mRNAs in live cells using split fluorescent proteins.. Scientific Reports. 4:3615.
Lee Y-T, Senturk M, Guan Y, Wang MC.  2024.  Bacteria-organelle communication in physiology and disease. J Cell Biol. 223(7)
McArthur K, Whitehead LW, Heddleston JM, Li L, Padman BS, Oorschot V, Geoghegan ND, Chappaz S, Davidson S, San Chin H et al..  2018.  BAK/BAX macropores facilitate mitochondrial herniation and mtDNA efflux during apoptosis.. Science (New York, N.Y.). 359(6378)