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Deato MDivina E, Marr MT, Sottero T, Inouye C, Hu P, Tjian R.  2008.  MyoD targets TAF3/TRF3 to activate myogenin transcription.. Molecular Cell. 32(1):96-105.
Deato MDivina E, Tjian R.  2007.  Switching of the core transcription machinery during myogenesis.. Genes & Development. 21(17):2137-49.
Deaconescu AM, Sevostyanova A, Artsimovitch I, Grigorieff N.  2012.  Nucleotide excision repair (NER) machinery recruitment by the transcription-repair coupling factor involves unmasking of a conserved intramolecular interface.. Proceedings of the National Academy of Sciences of the United States of America. 109:3353-8.
Deaconescu AM, Artsimovitch I, Grigorieff N.  2012.  Interplay of DNA repair with transcription: from structures to mechanisms.. Trends in Biochemical Sciences. 37(12):543-52.
De Zitter E, Hugelier S, Duwé S, Vandenberg W, Tebo AG, Van Meervelt L, Dedecker P.  2020.  Integrated structure-function dataset reveals key mechanisms underlying photochromic fluorescent proteins. bioRxiv. :2020.09.25.313528.
De Zitter E, Hugelier S, Duwé S, Vandenberg W, Tebo AG, Van Meervelt L, Dedecker P.  2021.  Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System.. Angew Chemie (International Edition English).
de Turris V, Nicholson P, Orozco RZamudio, Singer RH, Mühlemann O.  2011.  Cotranscriptional effect of a premature termination codon revealed by live-cell imaging.. RNA. 17(12):2094-107.
De Niz M, García REscobedo, Ramirez CTerán, Pakowski Y, Abonza Y, Bialy N, Orr VL, Olivera A, Abonza V, Alleva K et al..  2024.  Building momentum through networks: Bioimaging across the Americas. Journal of Microscopy. n/a
de la Peña JBryan, Barragan-Iglesias P, Lou T-F, Kunder N, Loerch S, Shukla T, Basavarajappa L, Song J, James DN, Megat S et al..  2021.  Intercellular Arc Signaling Regulates Vasodilation.. Journal of Neuroscience.
M de la Cruz J, Martynowycz MW, Hattne J, Gonen T.  2019.  MicroED data collection with SerialEM.. Ultramicroscopy. 201:77-80.
M de la Cruz J, Hattne J, Shi D, Seidler P, Rodriguez J, Reyes FE, Sawaya MR, Cascio D, Weiss SC, Kim SKyung et al..  2017.  Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.. Nature Methods. 14(4):399-402.
de la Cruz MJason, Martynowycz M, Hattne J, Shi D, Gonen T.  2017.  A method to minimize condenser lens-induced hysteresis effects in a JEOL JEM-3200FSC microscope to enable stable cryoEM low-dose operations.. bioRxiv.
de Juan-Sanz J, Holt GT, Schreiter ER, de Juan F, Kim DS, Ryan TA.  2017.  Axonal Endoplasmic Reticulum Ca(2+) Content Controls Release Probability in CNS Nerve Terminals.. Neuron. 93(4):867-81.
Davis GK, Srinivasan DG, Wittkopp PJ, Stern DL.  2007.  The function and regulation of Ultrabithorax in the legs of Drosophila melanogaster.. Dev Biol. 308(2):621-31.
Davis FP, Nern A, Picard S, Reiser MB, Rubin GM, Eddy SR, Henry GL.  2020.  A genetic, genomic, and computational resource for exploring neural circuit function.. eLife. 9
Davis FP.  2011.  Phosphorylation at the interface.. Structure . 19:1726-7.
Davis FP, Eddy SR.  2013.  Transcription factors that convert adult cell identity are differentially polycomb repressed.. PLoS One. 8(5):e63407.
Davis FP.  2011.  Proteome-wide prediction of overlapping small molecule and protein binding sites using structure.. Molecular BioSystems. 7(2):545-57.
Davis FP, Eddy SR.  2009.  A tool for identification of genes expressed in patterns of interest using the Allen Brain Atlas.. Bioinformatics. 25(13):1647-54.
Davis GK, Brisson JA, Stern DL.  2007.  Gene expression patterns underlying wing polyphenism and polymorphism in the pea aphid. Society for Integrative and Comparative Biology. 46:E186-E186.
Davis FP, Sali A.  2010.  The overlap of small molecule and protein binding sites within families of protein structures.. PLoS Computational Biology. 6(2):e1000668.
Davie JT, Kole MHP, Letzkus JJ, Rancz EA, Spruston N, Stuart GJ, Häusser M.  2006.  Dendritic patch-clamp recording.. Nature Protocols. 1(3):1235-47.
Davidsen K, Marvin JS, Aggarwal A, Brown TA, Sullivan LB.  2024.  An engineered biosensor enables dynamic aspartate measurements in living cells.. Elife. 12
David AF, Roudot P, Legant WR, Betzig E, Danuser G, Gerlich DW.  2019.  Augmin accumulation on long-lived microtubules drives amplification and kinetochore-directed growth.. Journal of Cell Biology. 218(7):2150-68.
Dauguet J, Bock D, R Reid C, Warfield SK.  2007.  Alignment of large image series using cubic B-splines tessellation: application to transmission electron microscopy data.. Medical Image Computing and Computer-Assisted Intervention: MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 10:710-7.