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Wang S.  2018.  Single Molecule RNA FISH (smFISH) in Whole-Mount Mouse Embryonic Organs. Current Protocols in Cell Biology. 83:e79.
Damon LJ, Aaron J, Palmer AE.  2022.  Single molecule microscopy to profile the effect of zinc status on transcription factor dynamics.. Scientific Reports. 12(1):17789.
Damon LJ, Aaron J, Palmer AE.  2022.  Single molecule microscopy to profile the effect of zinc status of transcription factor dynamics. bioRxiv.
Buttler CA, Pezeshkian N, Fernandez MV, Aaron J, Norman S, Freed EO, Van Engelenburg SB.  2018.  Single molecule fate of HIV-1 envelope reveals late-stage viral lattice incorporation.. Nature Communications. 9(1):1861.
Bloss EB, Cembrowski MS, Karsh B, Colonell J, Fetter RD, Spruston N.  2018.  Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites.. Nature Neuroscience. 21(3):353-63.
Newhart A, Rafalska-Metcalf IU, Yang T, Joo LM, Powers SLawrence, Kossenkov AV, Lopez-Jones M, Singer RH, Showe LC, Skordalakes E et al..  2013.  Single cell analysis of RNA-mediated histone H3.3 recruitment to a cytomegalovirus promoter-regulated transcription site.. The Journal of Biological Chemistry. 288(27):19882-99.
Qu L, Long F, Liu X, Kim S, Myers E, Peng H.  2011.  Simultaneous recognition and segmentation of cells: application in C. elegans.. Bioinformatics. 27(20):2895-902.
Dora M, Obara CJ, Abel T, Lippincott-Schwarz J, Holcman D.  2023.  Simultaneous photoactivation and high-speed structural tracking reveal diffusion-dominated motion in the endoplasmic reticulum. bioRxiv.
Pnevmatikakis EA, Soudry D, Gao Y, Machado TA, Merel J, Pfau D, Reardon T, Mu Y, Lacefield C, Yang W et al..  2016.  Simultaneous denoising, deconvolution, and demixing of calcium imaging data.. Neuron. 89(2):285-99.
Suarez E, Lettieri S, Stringer CA, Zwier MC, Subramanian SRaman, Chong LT, Zuckerman DM.  2014.  Simultaneous computation of dynamical and equilibrium information using a weighted ensemble of trajectories. Journal of Chemical Theory and Computation. 10:2658–2667.
Suarez E, Lettieri S, Stringer CA, Zwier MC, Subramanian SRaman, Chong LT, Zuckerman DM.  2014.  Simultaneous computation of dynamical and equilibrium information using a weighted ensemble of trajectories. Journal of chemical theory and computation. 10:2658–2667.
Suarez E, Lettieri S, Stringer CA, Zwier MC, Subramanian SRaman, Chong LT, Zuckerman DM.  2014.  Simultaneous computation of dynamical and equilibrium information using a weighted ensemble of trajectories. Journal of chemical theory and computation. 10:2658–2667.
Suarez E, Lettieri S, Stringer CA, Zwier MC, Subramanian SRaman, Chong LT, Zuckerman DM.  2014.  Simultaneous computation of dynamical and equilibrium information using a weighted ensemble of trajectories. Journal of chemical theory and computation. 10:2658–2667.
Hampel S, McKellar CE, Simpson JH, Seeds AM.  2017.  Simultaneous activation of parallel sensory pathways promotes a grooming sequence in Drosophila.. eLife. 6
Gornet J, Scheffer LK.  2017.  Simulating extracted connectomes.. bioRxiv.
Alves D, Arkani-Hamed N, Arora S, Bai Y, Baumgart M, Berger J, Buckley M, Butler B, Chang S, Cheng H-C et al..  2012.  Simplified models for LHC new physics searches. Journal of Physics G: Nuclear and Particle Physics. 39(10):105005.
Fiolka R, Wicker K, Heintzmann R, Stemmer A.  2009.  Simplified approach to diffraction tomography in optical microscopy.. Optics Express. 17(15):12407-17.
Zabala F, Polidoro P, Robie AA, Branson K, Perona P, Dickinson MH.  2012.  A simple strategy for detecting moving objects during locomotion revealed by animal-robot interactions.. Current Biology. 22(14):1344-50.
Gruntman E, Romani S, Reiser MB.  2018.  Simple integration of fast excitation and offset, delayed inhibition computes directional selectivity in Drosophila.. Nature Neuroscience. 21(2):250-7.
Zhang R, Chouket R, Tebo AG, Plamont M-A, Kelemen Z, Gissot L, Faure J-D, Gautier A, Croquette V, Jullien L et al..  2019.  Simple imaging protocol for autofluorescence elimination and optical sectioning in fluorescence endomicroscopy. Optica. 6:972.
Parisi MA, Clayton DA.  1991.  Similarity of human mitochondrial transcription factor 1 to high mobility group proteins.. Science. 252(5008):965-9.
Brisson JA, Nuzhdin SV, Stern DL.  2009.  Similar patterns of linkage disequilibrium and nucleotide diversity in native and introduced populations of the pea aphid, Acyrthosiphon pisum.. BMC Genetics. 10:22.
Murphy GJ, Rieke F.  2008.  Signals and noise in an inhibitory interneuron diverge to control activity in nearby retinal ganglion cells.. Nature Neuroscience. 11(3):318-26.
Jin DZ, Zhao T, Hunt DL, Tillage RP, Hsu C-L, Spruston N.  2019.  ShuTu: Open-source software for efficient and accurate reconstruction of dendritic morphology.. Frontiers in Neuroinformatics. 13:68.
Romani S, Tsodyks M.  2015.  Short-term plasticity based network model of place cells dynamics.. Hippocampus. 25(1):94-105.