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O
Ohayon S, Avni O, Taylor AL, Perona P, Egnor SERoian.  2013.  Automated multi-day tracking of marked mice for the analysis of social behaviour.. Journal of Neuroscience Methods. 219(1):10-19.
Ofstad TA, Zuker CS, Reiser MB.  2011.  Visual place learning in Drosophila melanogaster.. Nature. 474(7350):204-7.
Offenhäuser N, Castelletti D, Mapelli L, Soppo BEkalle, Regondi MCristina, Rossi P, D'Angelo E, Frassoni C, Amadeo A, Tocchetti A et al..  2006.  Increased ethanol resistance and consumption in Eps8 knockout mice correlates with altered actin dynamics.. Cell. 127(1):213-26.
Ochiai H, Hayashi T, Umeda M, Yoshimura M, Harada A, Shimizu Y, Nakano K, Saitoh N, Liu Z, Yamamoto T et al..  2020.  Genome-wide kinetic properties of transcriptional bursting in mouse embryonic stem cells.. Science Advances. 6(25):eaaz6699.
Och FJ, Gildea D, Khudanpur S, Sarkar A, Yamada K, Fraser A, Kumar S, Shen L, Smith D, Eng K et al..  2004.  A smorgasbord of features for statistical machine translation.. Human Language Technology and 5th Meeting of the NAACL.
Obara CJ, Nixon-Abell J, Moore AS, Riccio F, Hoffman DP, Shtengel G, C. Xu S, Schaefer K, H. Pasolli A, Masson J-B et al..  2022.  Motion of single molecular tethers reveals dynamic subdomains at ER-mitochondria contact sites. bioRxiv.
Obara CJ, Moore AS, Lippincott-Schwartz J.  2022.  Structural Diversity within the Endoplasmic Reticulum-From the Microscale to the Nanoscale.. Cold Spring Harbor Perspectives in Biology.
Obara CJ, Moore AS, Lippincott-Schwartz J.  2023.  Structural Diversity within the Endoplasmic Reticulum-From the Microscale to the Nanoscale.. Cold Spring Harbor Perspectives in Biology. 15(6)
Obara CJ, Nixon-Abell J, Moore AS, Riccio F, Hoffman DP, Shtengel G, C Xu S, Schaefer K, H Pasolli A, Masson J-B et al..  2024.  Motion of VAPB molecules reveals ER-mitochondria contact site subdomains.. Nature. 626(7997):169-176.
O'Leary TP, Sullivan KE, Wang L, Clements J, Lemire AL, Cembrowski MS.  2020.  Extensive and spatially variable within-cell-type heterogeneity across the basolateral amygdala.. eLife. 9
O'Brien TC, Mackey ZB, Fetter RD, Choe Y, O'Donoghue AJ, Zhou M, Craik CS, Caffrey CR, McKerrow JH.  2008.  A parasite cysteine protease is key to host protein degradation and iron acquisition.. Journal of Biological Chemistry. 283(43):28934-43.
N
Nunez-Iglesias J, Kennedy R, Parag T, Shi J, Chklovskii DB.  2013.  Machine learning of hierarchical clustering to segment 2D and 3D images.. PLoS One. 8:e71715.
Nunez-Iglesias J, Kennedy R, Plaza SM, Chakraborty A, Katz WT.  2014.  Graph-based active learning of agglomeration (GALA): a Python library to segment 2D and 3D neuroimages. Frontiers in Neuroinformatics. 8:34.
Northcutt AJ, Kick DR, Otopalik AG, Goetz BM, Harris RM, Santin JM, Hofmann HA, Marder E, Schulz DJ.  2019.  Molecular Profiling to Infer Neuronal Cell Identity: Lessons from small ganglia of the Crab Cancer borealis. bioRxiv.
Northcutt AJ, Kick DR, Otopalik AG, Goetz BM, Harris RM, Santin JM, Hofmann HA, Marder E, Schulz DJ.  2021.  Molecular profiling of single neurons of known identity in two ganglia from the crab Cancer borealis. Proceedings of the National Academy of Sciences. 116(52):26980-26990.
Normanno D, Dahan M, Darzacq X.  2012.  Intra-nuclear mobility and target search mechanisms of transcription factors: a single-molecule perspective on gene expression.. Biochimica et Biophysica Acta. 1819(6):482-93.
Normanno D, Boudarene L, Dugast-Darzacq C, Chen J, Richter C, Proux F, Bénichou O, Voituriez R, Darzacq X, Dahan M.  2015.  Probing the target search of DNA-binding proteins in mammalian cells using TetR as model searcher.. Nature Communications. 6:7357.
Noorman M, Hulse BK, Jayaraman V, Romani S, Hermundstad AM.  2022.  Accurate angular integration with only a handful of neurons.. bioRxiv.
Noordermeer D, de Wit E, Klous P, van de Werken H, Simonis M, Lopez-Jones M, Eussen B, de Klein A, Singer RH, de Laat W.  2011.  Variegated gene expression caused by cell-specific long-range DNA interactions.. Nature Cell Biology. 13(8):944-51.
Noorbakhsh J, Schwab DJ, Sgro AE, Gregor T, Mehta P.  2015.  Modeling oscillations and spiral waves in Dictyostelium populations.. Phys Rev E Stat Nonlin Soft Matter Phys. 91(6):062711.
Nonnenmacher M, Turaga SC, Macke JH.  2017.  Extracting low-dimensional dynamics from multiple large-scale neural population recordings by learning to predict correlations.. 31st Conference on Neural Information Processing Systems (NIPS 2017).
Nolan MF, Dudman JT, Dodson PD, Santoro B.  2007.  HCN1 channels control resting and active integrative properties of stellate cells from layer II of the entorhinal cortex.. The Journal of Neuroscience. 27(46):12440-51.
Nolan MF, Malleret G, Lee KHung, Gibbs E, Dudman JT, Santoro B, Yin D, Thompson RF, Siegelbaum SA, Kandel ER et al..  2003.  The hyperpolarization-activated HCN1 channel is important for motor learning and neuronal integration by cerebellar Purkinje cells.. Cell. 115(5):551-64.
Nixon-Abell J, Obara CJ, Weigel AV, Li D, Legant WR, Xu CS, H Pasolli A, Harvey K, Hess HF, Betzig E et al..  2016.  Increased spatiotemporal resolution reveals highly dynamic dense tubular matrices in the peripheral ER.. Science (New York, N.Y.). 354(6311):433-46.
Nikolaev YA, Ziolkowski LH, Pang S, Li W-P, Feketa VV, C. Xu S, Gracheva EO, Bagriantsev SN.  2023.  3D architecture and a bi-cellular mechanism of touch detection in mechanosensory corpuscle. Science Advances. 9(37):eadi4147.