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2025
Yoo J, Xie F, Butrus S, Xu R, Tan Z, Gorzek R, Mirshahidi P, Tring E, Suresh S, Kim J et al..  2025.  Establishing a continuum of cell types in the visual cortex. bioRxiv.
Moret A, Farrants H, Fan R, Zingg KG, Silva B, Roselli C, Oertner TG, Gee CE, Hadjieconomou D, Rangaraju V et al..  2025.  An expanded palette of bright and photostable organellar Ca2+ sensors. eLife.
Dalangin R, Jia BZ, Qi Y, Aggarwal A, Sakoi K, Drobizhev M, Molina RS, Patel R, Abdelfattah AS, Zheng J et al..  2025.  Far-red fluorescent genetically encoded calcium ion indicators.. Nat Commun. 16(1):3318.
Mi X, Chen ABo-Yuan, Duarte D, Carey E, Taylor CR, Braaker PN, Bright M, Almeida RG, Lim J-X, Ruetten VMS et al..  2025.  Fast, accurate, and versatile data analysis platform for the quantification of molecular spatiotemporal signals.. Cell.
Moore AS, Krug T, Hansen SB, Ludlow AV, Grimm JB, Ayala AX, Plutkis SE, Wang N, Goldman RD, Medalia O et al..  2025.  FilaBuster: A strategy for rapid, specific, and spatiotemporally controlled intermediate filament disassembly. bioRxiv.
Makarova AA, Chua NJ, Diakova AV, Desyatirkina IA, Gunn P, Pang S, C Xu S, Hess HF, Chklovskii DB, Polilov AA.  2025.  The first complete 3D reconstruction and morphofunctional mapping of an insect eye. eLife.
Makarova AA, Chua NJ, Diakova AV, Desyatirkina IA, Gunn P, Pang S, C Xu S, Hess H, Chklovskii DB, Polilov AA.  2025.  The first complete 3D reconstruction and morphofunctional mapping of an insect eye.
Vohra SK, Eberle M, Boulanger-Weill J, Petkova MD, Schuhknecht GFP, Herrera KJ, Kämpf F, Ruetten VMS, Lichtman JW, Engert F et al..  2025.  Fishexplorer: A multimodal cellular atlas platform for neuronal circuit dissection in larval zebrafish. bioRxiv.
Grima LL, Haberkern H, Mohanta R, Morimoto MM, Rajagopalan AE, Scholey EV.  2025.  Foraging as an ethological framework for neuroscience.. Trends Neurosci.
Averbukh M, Nelson H, Wang T, Lange CM, Alcala A, Nair T, Kim J, Suh D, Vega M, Gao SMax et al..  2025.  Form and function of actin impacts actin health and aging. bioRxiv.
Alshaabi T, Milkie D, Liu G, Shirazinejad C, Hong J, Achour K, Görlitz F, Milunovic-Jevtic A, Simmons C, Abuzahriyeh I et al..  2025.  Fourier-Based 3D Multistage Transformer for Aberration Correction in Multicellular Specimens. Research Square.
Alshaabi T, Milkie DE, Liu G, Shirazinejad C, Hong JL, Achour K, Görlitz F, Milunovic-Jevtic A, Simmons C, Abuzahriyeh IS et al..  2025.  Fourier-based three-dimensional multistage transformer for aberration correction in multicellular specimens.. Nat Methods.
Jacob LPL, Bailes SM, Stringer C, Polimeni JR, Lewis LD.  2025.  Functional MRI signals as fast as 1Hz are coupled to brain states and predict spontaneous neural activity. bioRxiv.
Sakthivelu V, Schmitt A, Odenthal F, Ndoci K, Touet M, Shaib AH, Chihab A, Wani GA, Nieper P, Hartmann GG et al..  2025.  Functional synapses between neurons and small cell lung cancer.. Nature.
Banerjee A, Chatterjee M, Tan KJunn, Tay S, Duan K, Andiappan AKumar, Howland SWu, Aso Y, Aw SShiying.  2025.  GABAergic neuronal dysfunction underlies tremor in a Drosophila model of Spinocerebellar ataxia 3. Dis Model Mech.
Koshenov Z, Kokotos AC, Benedetti L, Schwartz JLippincott, Ryan TA.  2025.  A genetic driver of epileptic encephalopathy impairs gating of synaptic glycolysis. bioRxiv.
Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie ME, MacLennan BJ, Hagihara KM et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. Nat Methods.
Podgorski K, Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie M, Maclennan B et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. Research Square.
Hou X, Li Y, Hobson CM, Shroff H, Guo M, Liu H.  2025.  HD2Net: A deep learning framework for simultaneous denoising and deaberration in fluorescence microscopy. bioRxiv.
Hou X, Li Y, Hobson CM, Shroff H, Guo M, Liu H.  2025.  HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy. bioRxiv.
Zhu Z, Gong R, Rodriguez V, Quach KT, Chen X, Sternson SM.  2025.  Hedonic eating is controlled by dopamine neurons that oppose GLP-1R satiety.. Science. 387(6741):eadt0773.
Kim J, Liu ZJ.  2025.  High-resolution imaging of RNA and proteins in thick tissues using cycleHCR.. Nat Rev Genet.
Almeida JA, Avila DB, Longmore GD, Pathak A.  2025.  History of hypoxia exposure aids future cell invasion according to cell type and collagen density.. Mol Biol Cell. :mbcE24120580.
Rokicki K, Schauder D, Olbris DJ, Goina C, Clements J, Edson P, Kawase T, Svirskas R, Arshadi C, Feng D et al..  2025.  HortaCloud: An open and collaborative platform for whole brain neuronal reconstructions. bioRxiv.
Hou K, Ge P, Sawaya MR, Lutter L, Dolinsky JL, Yang Y, Jiang YXiao, Boyer DR, Cheng X, Pi J et al..  2025.  How short peptides disassemble tau fibrils in Alzheimer's disease. Nature.