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2026
Grima LL, Guo Y, Narayan L, Hermundstad AM, Dudman JT.  2026.  A global dopaminergic learning rate enables adaptive foraging across many options.. Neuron.
Allier C, Heinrich L, Schneider M, Saalfeld S.  2026.  Graph neural networks uncover structure and functions underlying the activity of simulated neural assemblies. arXiv.
Hulse BK, Aneesh P.B., Romani S, Jayaraman V, Hermundstad AM.  2026.  Hidden symmetries in network connectivity support ring attractor dynamics in the fly’s neural compass. bioRxiv.
O’Connell S, Michaels JA, Wang R, Mamidipaka S, Venkatesh M, Aresh N, Pachitariu M, J. Pruszynski A, Sober SJ, Pandarinath C.  2026.  High performance sorting of motor unit action potentials with EMUsort. bioRxiv.
O’Connell S, Michaels JA, Wang R, Mamidipaka S, Venkatesh M, Aresh N, Pachitariu M, J Pruszynski A, Sober SJ, Pandarinath C.  2026.  High performance sorting of motor unit action potentials with EMUsort. eLife.
Zhang J, Gong D, Barrios AM, Itkis DG, Sahni K, Fandl H, Uenaka T, Walton RT, Plutkis SE, Lavis L et al..  2026.  A high-throughput all-optical platform for mapping gene perturbations to electrophysiology. bioRxiv.
Cedeño-Rosario L, Alcantara QA, Sierra NA, Prasad P, Wright J, Lam G, Abdi N, Florence J, Bott AJ, Heyden K et al..  2026.  Hyperactivation of β-catenin rewires mitochondrial fuel selection in liver cancer cells. bioRxiv.
Marvin JS, Tsives A, Huang SMing, Koshenov Z, Adhikari R, Wolfe AD, Gonzalez IJ, Feliciano D, Ryan TA, Merrins MJ et al..  2026.  iG6PSnFR: A genetically encoded fluorescent sensor for observing glucose-6-phosphate dynamics in living preparations.. bioRxiv.
Kolb I, Hasseman JP, Matsumoto A, Jensen TP, Kopach O, Arthur BJ, Zhang Y, Tsang A, Reep D, Tsegaye G et al..  2026.  iGABASnFR2 is an improved genetically encoded protein sensor of GABA. eLife.
Braxton JR, Qu S, Skinner WM, Shiozaki M, Jean N, Yan R, Zhao X, Yu Z, Lishko PV, Chen Z.  2026.  In situ molecular architecture of the mammalian sperm nuclear vacuole. bioRxiv.
Shtengel DH, Shtengel G, C. Xu S, Hess HF.  2026.  Image analysis tools for Electron Microscopy. bioRxiv.
Schmidt A, Balasubramanian H, Komoto S, Malacrida L, Prats C, Reiche M, Aaron J, Chew T-L.  2026.  Imaging around the globe: Tailoring microscopy outreach to local research demands.. J Microsc.
Ruetten VMS, Zheng W, Siwanowicz I, Mensh BD, Eddison M, Hu A, Chi Y, Lemire AL, Guo C, Kadobianskyi M et al..  2026.  Imaging cellular activity simultaneously across all organs of a vertebrate reveals body-wide circuits. Nature.
Azur RAngelo G, Feliciano D, Espinosa-Medina I, Adhikari R, Lilao-Garzón J, Jansen E, Yang C-P, Lee T.  2026.  Imp1 acts as a dosage- and stage-dependent temporal rheostat orchestrating radial glial fate transitions and cortical morphogenesis. eLife.
Tyler J, Vishwanath AAmrapali, Menon T, Duarah T, Adhikari R, Koberstein JN, Feliciano D, Espinosa-Medina I, Colón-Ramos D, Tebo AG.  2026.  Improved sensors for fructose-1,6-bisphosphate enable in vivo imaging of glycolysis. bioRxiv.
Shettigar N, Zhang L-Q, Teran J, Schuster L, Sohn A, Branson K, Dennis EJane.  2026.  Mus musculus mice self-organize existing behaviors into structured bouts as they become expert hunters.. bioRxiv.
Zhang L-Q, Verma N, Coddington LT, Dudman JT, Branson K, Hermundstad AM.  2026.  Inductive bias anchors a scaling law for biological learning. bioRxiv.
Vicidomini R, Han THee, Hsieh W-C, Nguyen P, Li J, Giniger E, Serpe M.  2026.  Integration of Semaphorin/Plexin activation and amplification by a Neuropilin-like coreceptor ensures robust homeostatic plasticity.. Proc Natl Acad Sci U S A. 123(37):e2604252123.
Park IMemming, Vermani A, de Polavieja GG, Gallego JÁlvaro, Esfahany K, Saxena S, Orger M, Ijspeert A, Dowling M, McNamee D et al..  2026.  Integrative neurocybernetic modeling in the era of large-scale neuroscience. arXiv.
Müller A, Duran SAurrecoech, Santos PI, Weigel A, Espinosa-Medina I, Solimena M.  2026.  Islet ultrastructure: past achievements and future directions.. Diabetologia. 69(9):2379-2395.
Qi Y, Parot VJ, Wu X, Plutkis SE, Lavis LD, Cohen AE.  2026.  Large-scale all-optical electrophysiology links excitability and connectivity to circuit dynamics in vivo. bioRxiv.
Fleishman GM, P. Fletcher T.  2026.  LDDMEm: Large Deformation Diffeomorphic Metric Embedding. Medical Image Computing and Computer Assisted Intervention – MICCAI 2025.
Xue K, Rezayat F, Qi T, Shen L, Zhao B, Huang X, Marvin JS, Ye L.  2026.  Learning Shapes the Energy Cost of Neural Tasks.. bioRxiv.
J Lee Q, Zutshi I, Alexander AS, Hermundstad AM.  2026.  Learning to Navigate a Changing World: From Brain Systems to Novel Algorithms. J Neurosci. 46(45)
Fiore A.  2026.  Light as a Probe for Living Systems: Mapping Tissue Mechanics, Extracellular Matrix Architecture, and Ion Signaling. Microscopy and Microanalysis. 32:ozag053.474.