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2025
Alshaabi T, Milkie DE, Liu G, Shirazinejad C, Hong JL, Achour K, Görlitz F, Milunovic-Jevtic A, Simmons C, Abuzahriyeh IS et al..  2025.  Fourier-based three-dimensional multistage transformer for aberration correction in multicellular specimens.. Nat Methods.
Jacob LPL, Bailes SM, Stringer C, Polimeni JR, Lewis LD.  2025.  Functional MRI signals as fast as 1Hz are coupled to brain states and predict spontaneous neural activity. bioRxiv.
Sakthivelu V, Schmitt A, Odenthal F, Ndoci K, Touet M, Shaib AH, Chihab A, Wani GA, Nieper P, Hartmann GG et al..  2025.  Functional synapses between neurons and small cell lung cancer.. Nature.
Banerjee A, Chatterjee M, Tan KJunn, Tay S, Duan K, Andiappan AKumar, Howland SWu, Aso Y, Aw SShiying.  2025.  GABAergic neuronal dysfunction underlies tremor in a Drosophila model of Spinocerebellar ataxia 3. Dis Model Mech.
Koshenov Z, Kokotos AC, Benedetti L, Schwartz JLippincott, Ryan TA.  2025.  A genetic driver of epileptic encephalopathy impairs gating of synaptic glycolysis. bioRxiv.
Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie ME, MacLennan BJ, Hagihara KM et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. bioRxiv.
Podgorski K, Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie M, Maclennan B et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. Research Square.
Hou X, Li Y, Hobson CM, Shroff H, Guo M, Liu H.  2025.  HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy. bioRxiv.
Hou X, Li Y, Hobson CM, Shroff H, Guo M, Liu H.  2025.  HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy. bioRxiv.
Zhu Z, Gong R, Rodriguez V, Quach KT, Chen X, Sternson SM.  2025.  Hedonic eating is controlled by dopamine neurons that oppose GLP-1R satiety.. Science. 387(6741):eadt0773.
Kim J, Liu ZJ.  2025.  High-resolution imaging of RNA and proteins in thick tissues using cycleHCR.. Nat Rev Genet.
Almeida JA, Avila DB, Longmore GD, Pathak A.  2025.  History of hypoxia exposure aids future cell invasion according to cell type and collagen density.. Mol Biol Cell. :mbcE24120580.
Rokicki K, Schauder D, Olbris DJ, Goina C, Clements J, Edson P, Kawase T, Svirskas R, Arshadi C, Feng D et al..  2025.  HortaCloud: An Open and Collaborative Platform for Whole Brain Neuronal Reconstructions. bioRxiv.
Hou K, Ge P, Sawaya MR, Lutter L, Dolinsky JL, Yang Y, Jiang YXiao, Boyer DR, Cheng X, Pi J et al..  2025.  How short peptides disassemble tau fibrils in Alzheimer's disease. Nature.
Kolb I, Hasseman JP, Matsumoto A, Arthur BJ, Zhang Y, Tsang A, Reep D, Tsegaye G, Zheng J, Patel R et al..  2025.  iGABASnFR2: Improved genetically encoded protein sensors of GABA. bioRxiv.
Kolb I, Hasseman JP, Matsumoto A, Jensen TP, Kopach O, Arthur BJ, Zhang Y, Tsang A, Reep D, Tsegaye G et al..  2025.  iGABASnFR2: Improved genetically encoded protein sensors of GABA. eLife.
Pandya RD, Lackner EM, C Xu S, Zugates C, Burdyniuk M, Reyna-Neyra A, Pandya VD, Li W-P, Pang S, Weisz OA et al..  2025.  Illuminating Renal Proximal Tubule Architecture through High-Resolution Volume EM and Machine Learning Analysis.. J Am Soc Nephrol.
Ruetten VMS, Zheng W, Siwanowicz I, Mensh BD, Eddison M, Hu A, Chi Y, Lemire AL, Guo C, Kadobianskyi M et al..  2025.  Imaging cellular activity simultaneously across all organs of a vertebrate reveals body-wide circuits. bioRxiv.
Chen T-W, Bin Huang X-, Plutkis SE, Holland KL, Lavis LD, Lin B-J.  2025.  Imaging neuronal voltage beyond the scattering limit. Nat Methods.
Zheng Y, Cai R, Wang K, Zhang J, Zhuo Y, Dong H, Zhang Y, Wang Y, Deng F, Ji E et al..  2025.  In vivo multiplex imaging of dynamic neurochemical networks with designed far-red dopamine sensors. Science.
Marques MP, Sun B, Park Y-J, Jackson T, Lu T-C, Qi Y, Harrison E, Wang MC, Venkatachalam K, Pasha OMoussa et al..  2025.  In-situ glial cell-surface proteomics identifies pro-longevity factors in Drosophila. bioRxiv.
Beyene AG.  2025.  (Invited) Nanoscale Insights into Dopamine Release: Single-Strand DNA Functionalized SWCNTs in Neuroscience. ECS Meeting Abstracts. MA2025-01:933.
Tran S, Emtage J, Zhang C, Liu X, Lecoeuche M, Andreev A, Oikonomou G, Narayan S, Garcia B, Cammidge T et al..  2025.  stk32a links sleep homeostasis to suppression of sensory and motor systems. bioRxiv.
Joseph S, Schnicker NJ, Spellmon N, Xu Z, Yan R, Yu Z, Davulcu O, Yang T, Hopkins J, Anderson ME et al..  2025.  LARGE1 processively polymerizes length-controlled matriglycan on prodystroglycan.. Nat Commun. 16(1):9028.
Trautmann EM, Hesse JK, Stine GM, Xia R, Zhu S, O'Shea DJ, Karsh B, Colonell J, Lanfranchi FF, Vyas S et al..  2025.  Large-scale high-density brain-wide neural recording in nonhuman primates.. Nat Neurosci.